Template-based Modeling Results for YIIE_ECOLI

Submitted Primary Sequence

>Length 70
MNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEVVGVDDQCKEHKE
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--------10--------20--------30--------40--------50--------60--------70

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEVVGVDDQCKEHKE
CCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEVVGVDDQCKEHKE
5431002113300320240202340221200220032014323231231310234032212321132355
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEVVGVDDQCKEHKE
1	MUSTER	2k5jA	0.414	1.000	2.554	threading_1	MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGWQGCEEDGVEYQRKLREE
2	SPARKS	2k5ja	0.414	1.000	3.438	threading_2	MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTVPGIWQGCEEDGVEYQRKLREE
3	PROSPECT2	2k5jA	0.429	1.000	0.838	threading_3	MNRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARSVPGIWQGCEEDGVEYQRKLREE
4	PPA-I	2k5jA	0.414	1.000	3.208	threading_4	MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARSVPGIWQGCEEDGVEYQRKLREE
5	HHPRED-l	2k5j_A	0.391	0.986	6.452	threading_5	MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTRTSVPGIWQGCEEDGVEYQRKLRE-
6	HHPRED-g	2k5j_A	0.400	1.000	4.629	threading_6	MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTRTSVPGIWQGCEEDGVEYQRKLREE
7	SP3	2k5ja	0.400	1.000	3.490	threading_7	MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTRTSVPGIWQGCEEDGVEYQRKLREE
8	SAM-T99	2k5jA	0.414	1.000	4.381	threading_8	MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQQTARTSVPGIWQGCEEDGVEYQRKLREE
9	MUSTER	3h87C	0.179	0.957	1.117	threading_9	LIR---DIPDDVLASLDAIAARLGLSRTEYIRRRLAQDAQTARVTVTAADLRRLRGAVAGLGDPELMRQA
10	SPARKS	3h87c	0.171	1.000	0.846	threading_10	SDVLIRDIPDDVLASLDAIAARLGLSRTEYIRRRLAQDAQTARVTVTAADLRRLRGAVAGLGDPELMRQA

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.586 to 2cpgB SCOP code=a.43.1.3	TM-score=0.585 to 1x93A SCOP code=a.43.1.3	TM-score=0.633 to 1ea4F SCOP code=a.43.1.3	TM-score=0.577 to 2bsqE SCOP code=a.43.1.8	TM-score=0.609 to 1ea4F SCOP code=a.43.1.3