Template-based Modeling Results for YIHD_ECOLI

Submitted Primary Sequence

>Length 89
MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
CCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
55133032003001211432331100100220033133323023001100001021242233120210232013101100021322244
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
1	MUSTER	2ko6A	0.989	1.000	3.994	threading_1	MKCKRLNEVIELLQPAWQKEPDFNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
2	SPARKS	2ko6a	0.989	1.000	4.173	threading_2	MKCKRLNEVIELLQPAWQKEPDFNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
3	PROSPECT2	2ko6A	0.989	1.000	1.853	threading_3	MKCKRLNEVIELLQPAWQKEPDFNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
4	PPA-I	2ko6A	0.989	1.000	5.871	threading_4	MKCKRLNEVIELLQPAWQKEPDFNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
5	HHPRED-l	2ko6_A	0.989	0.989	10.759	threading_5	MKCKRLNEVIELLQPAWQKEPDFNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIK-
6	HHPRED-g	2ko6_A	0.989	1.000	8.232	threading_6	MKCKRLNEVIELLQPAWQKEPDFNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
7	SP3	2ko6a	0.989	1.000	2.412	threading_7	MKCKRLNEVIELLQPAWQKEPDFNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
8	SAM-T99	2ko6A	0.989	1.000	7.379	threading_8	MKCKRLNEVIELLQPAWQKEPDFNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE
9	MUSTER	3d8bA2	0.147	0.843	0.769	threading_9	L----ASARKQIVINLMSKECCLS-EEEIEQIVQQSAFSG-MTQLCREASLGPIR-----SLQTVRPIA---YIDFENAFRTVRPSVSP
10	SPARKS	2bby_	0.164	0.753	0.695	threading_10	-RAADKQHVLDMLFSAFEKHQYYN----LKDLVDITKQPVYLKEILKEIGVQNVKGIHKNTWELKPEYRHYQ-----------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.483 to 1su3B SCOP code=a.20.1.2	TM-score=0.483 to 1su3B SCOP code=a.20.1.2	TM-score=0.483 to 1su3B SCOP code=a.20.1.2	TM-score=0.483 to 1su3B SCOP code=a.20.1.2	TM-score=0.483 to 1su3B SCOP code=a.20.1.2