Template-based Modeling Results for YIBN_ECOLI

Submitted Primary Sequence

>Length 143
MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCEECCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK
44201210130000000000000000000022122413202222013113432000000223310331102000001012011210220343331200000010110220030035111210000220010012331222424
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK
1	MUSTER	1gn0A	0.217	0.741	2.645	threading_1	---------------------------------MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDT-LGAFMRDN--DFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVAY
2	SPARKS	2kl3a	0.217	0.741	2.656	threading_2	-----------------------------------MEPQSDAHVLKSRLEWPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASSSL--EKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGII
3	PROSPECT2	1qxnA	0.157	0.888	2.077	threading_3	ADMGEKFDAT---------------FKAQVKAAKADMVMLSPKDAYKLLQNPDITLIDVRDPDELKAMGVKNYKHMSRGKL-EPLLAKSGLDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRS
4	PPA-I	1gn0A	0.215	0.748	3.547	threading_4	---------------------------------MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDT-LGAFMRDN--DFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEVAYG
5	HHPRED-l	2hhg_A	0.202	0.832	2.254	threading_5	-P---QTITR--------------GIKA-LDEANSSIETLTTADAIALHKSSDVVIVDIRDPREIERGKIPGSFSCTRG-LEFWIDPKPIFQEDKKFVFYCAGGLRSALAAKTAQD-GLKPVAHIEGGFGAWRDAGGPIE---
6	HHPRED-g	1gmx_A	0.219	0.734	1.897	threading_6	---------------------------------MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTL-GAFMRDN--DFDTPVMVM-YHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVAY
7	SP3	2kl3a	0.217	0.741	2.431	threading_7	-----------------------------------MEPQSDAHVLKSRLGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASSSL--EKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGII
8	SAM-T99	3tp9A	0.161	0.958	2.803	threading_8	IAPDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAH---IHDVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNV-GGYEAWRGKGFPVEA--
9	MUSTER	3tp9A3	0.198	0.706	2.598	threading_9	------------------------------------YANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKL-AAHIHDV--PRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNV-GGYEAWRGKGFPVEA--
10	SPARKS	3gk5a	0.250	0.699	2.523	threading_10	------------------------------------YRSINAADLYE--NIKAYTVLDVREPFELIFGSIANSINIPISELREK-WKIL--ERDKKYAVICAHGNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLE-

Predicted Tertiary Structure


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TM-score=0.847 to 1gn0A SCOP code=c.46.1.3	TM-score=0.853 to 1qxnA SCOP code=c.46.1.3	TM-score=0.734 to 1gn0A SCOP code=c.46.1.3	TM-score=0.821 to 1qxnA SCOP code=c.46.1.3	TM-score=0.863 to 1gn0A SCOP code=c.46.1.3