Template-based Modeling Results for YHDU_ECOLI


  Submitted Primary Sequence

>Length 59
MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM
12345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEECCCCCCCCCCC
12345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM
52431121110000011011001200210222223023232111010010322323444
12345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM
1PPA-I1s5li0.1320.6441.190threading_1-------METLKITVYIVVTFFVLLFVFGFLSGDPARNPKRKDLE--------------
2PPA-I2kv5A0.2120.5591.008threading_2-----MKDLMSLVIAPIFVGLVLEMISRVLDEEDDSRK---------------------
3MUSTER1qrjB0.2220.9150.910threading_3PTAKDLQDLLQYLCSSLVASLHHQQLDSLISEAET-RGITGYNPL----AGPLRVQANN
4SPARKS1xrda0.2500.8140.953threading_4MWRIWPRQALVGLATFLFVLALLIHFILLSTERFNWLEGASTKPVQTS-----------
5PROSPECT22x43S0.0960.8810.493threading_5MTRDQMKNAAAEAKDNVHDAAEVRDAVSSTVESIKDKLSGGSSS-------RASSYTLE
6PPA-I2wqgA0.2000.7630.997threading_6GSADYSSLTVVQLKDLLTKRLKNEWVQRLIKDDEESKGESEVSPQ--------------
7HHPRED-l1yew_C0.2220.9150.567threading_7EFETYWMNFLYTEIVLEIVTASILWGYLWKTR---DRNLAALTPREELRRNF-THQDG-
8HHPRED-g2kog_A0.3210.4750.721threading_8LKRKYWWKIILGVICAII---LIIIIVYFST----------------------------
9SP31nkd_0.2180.9320.636threading_9MTKQEKTALNMARFIRSQTLTLLEKLNELADAADEQADIESLHDH----ADELSCLARF
10SAM-T992ji2A20.3400.8980.735threading_10KIDGGYKVKVGAVAHPMEEKHYIQWIELLA--DDKCYT----QFLKPGQAPEAVFLIEA

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.363 to 1ppjI
SCOP code=d.184.1.3
TM-score=0.468 to 1r7gA
SCOP code=j.35.1.1
TM-score=0.603 to 1rsoA
SCOP code=a.194.1.1
TM-score=0.540 to 2jr8A
SCOP code=j.4.1.3
TM-score=0.289 to 1mi7R
SCOP code=a.4.12.1