Template-based Modeling Results for YHCN_ECOLI

Submitted Primary Sequence

>Length 87
MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK
CCHHHHHHHHHHHHHHHHHHHHCEECCHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK
432110000000000000001111102221134221001000102110122013101310453302000001032222010101013
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK
1	MUSTER	2jnaA	0.372	0.989	2.608	threading_1	MKK-RIIAAALLATVASFSTLAAEQVSKQEISHFKKVGTINVSQQISSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVYN
2	SPARKS	2jnaa	0.384	0.989	2.709	threading_2	MK-KRIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQQISSPSDLREKLSELADAKGGKYYHIIAARHGPNFEAVAEVYN
3	PROSPECT2	2nocA	0.337	0.989	1.203	threading_3	MKTGYKGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTG-EMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYK
4	PPA-I	2jnaA	0.384	0.989	3.359	threading_4	MK-KRIIAAALLATVASFSTLAAEQVSKQEISHFKKVGTINVSQQISSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVYN
5	HHPRED-l	2jna_A	0.376	0.977	6.349	threading_5	MKK-RIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQQISSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVY-
6	HHPRED-g	2jna_A	0.372	0.989	5.166	threading_6	MKKR-IIAAALLATVASFSTLAAEQVSKQEISHLVKVGTINVSQSISSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVYN
7	SP3	2jnaa	0.372	0.989	2.768	threading_7	MK-KRIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQQISSPSDLREKLSELADAKGGKYYHIIAAREHGNFEAVAEVYN
8	SAM-T99	2jnaA	0.376	0.977	2.934	threading_8	-MKKRIIAAALLATVASFSTLAAEQVSKQEIFKLVKVGTINVSGQISSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVY-
9	MUSTER	2nocA	0.376	0.977	2.519	threading_9	MKTGYKVM-LGALAFVVTNVYAAEIMKDKVASEYTKIGTISTTG-EMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYK
10	SPARKS	2noca	0.349	0.989	2.244	threading_10	MKTGYKVALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTG-EMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYK

Predicted Tertiary Structure


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TM-score=0.666 to 2jnaA SCOP code=d.230.6.1	TM-score=0.700 to 2jnaA SCOP code=d.230.6.1	TM-score=0.697 to 2jnaA SCOP code=d.230.6.1	TM-score=0.768 to 2nocA SCOP code=d.230.6.1	TM-score=0.684 to 2jnaA SCOP code=d.230.6.1