Template-based Modeling Results for YHBY_ECOLI


  Submitted Primary Sequence

>Length 97
MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR
CCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR
5523331122021111302000000231013200210220034230010200231431122003100431211001000210000223444423138
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR
1MUSTER1ln4A0.9791.0004.026threading_1MDLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPL
2SPARKS1ln4a0.9791.0004.048threading_2MDLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPL
3PROSPECT21ln4a0.9791.0002.187threading_3MDLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPE
4PPA-I1ln4A0.9791.0007.029threading_4MDLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPL
5HHPRED-l1jo0_A0.7400.9907.023threading_5TTLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQLIINAIVRETKAAQVQTIGHILVLYRPSEEAKIQLP-
6HHPRED-g1jo0_A0.7421.0005.644threading_6TTLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQLIINAIVRETKAAQVQTIGHILVLYRPSEEAKIQLPR
7SP31ln4a0.9791.0003.798threading_7MDLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPL
8SAM-T991rq8A0.3540.9904.548threading_8-MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENKEIELP
9MUSTER1rq8A0.3890.9793.711threading_9M-LTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKEKEIELP-
10SPARKS1rq8a0.3790.9793.703threading_10-MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKELAETLSEATRSELVQVIGSMIVIYRESKENEIELP-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.994 to 1ln4A
TM-score=0.999 to native
SCOP code=d.68.4.1
TM-score=0.994 to 1ln4A
TM-score=0.999 to native
SCOP code=d.68.4.1
TM-score=0.993 to 1ln4A
TM-score=0.998 to native
SCOP code=d.68.4.1
TM-score=0.994 to 1ln4A
TM-score=0.999 to native
SCOP code=d.68.4.1
TM-score=0.994 to 1ln4A
TM-score=0.999 to native
SCOP code=d.68.4.1

  Experimental Structure

Download 1ln4A
SCOP code=d.68.4.1