Template-based Modeling Results for YGGU_ECOLI

Submitted Primary Sequence

>Length 96
MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN
CCCEEEECCEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCEEEEEECCCHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN
442122223100010102131333212213222010001012221300110020003104013110101213214212020212330232013115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN
1	MUSTER	1yh5A	0.979	1.000	3.450	threading_1	MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEVAALIN
2	SPARKS	1n91a	0.979	1.000	3.503	threading_2	MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEVAALIN
3	PROSPECT2	1n91a	0.969	1.000	1.703	threading_3	MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEVAALIH
4	PPA-I	1yh5A	0.979	1.000	5.135	threading_4	MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEVAALIN
5	HHPRED-l	1n91_A	0.979	0.990	6.546	threading_5	MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEVAALI-
6	HHPRED-g	1n91_A	0.979	1.000	5.296	threading_6	MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEVAALIN
7	SP3	1n91a	0.979	1.000	3.618	threading_7	MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEVAALIN
8	SAM-T99	1yh5A	0.978	0.969	4.921	threading_8	MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEVAA---
9	MUSTER	1jrmA	0.226	0.969	2.968	threading_9	MDCLREVGDDLLVNIEVSPASGKFGIPSYNEKRIEVKIHSPPQKGKANREIIKEFSETFG---RDVEIVSGQKSRQKTIRIQGMDLFLKLVSEKFG
10	SPARKS	1jrma	0.242	0.948	2.816	threading_10	MDCLREVGDDLLVNIEVSPASGKFGIPSYNEKRIEVKIHSPPQKGKANREIIKEFSETFG---RDVEIVSGQKSRQKTIRIQGMG--RDLFLKLVS

Predicted Tertiary Structure


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TM-score=0.933 to 1yh5A SCOP code=d.206.1.1	TM-score=0.508 to 1nzyB SCOP code=c.14.1.3	TM-score=0.736 to 1yh5A SCOP code=d.206.1.1	TM-score=0.735 to 1yh5A SCOP code=d.206.1.1	TM-score=0.933 to 1yh5A SCOP code=d.206.1.1