Template-based Modeling Results for YGGL_ECOLI


  Submitted Primary Sequence

>Length 108
MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSELFDVWWD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSELFDVWWD
CCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSELFDVWWD
553332331322100310130001000202321233102200120021012012000111121112000002321402331110023003525122020030000116
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSELFDVWWD
1PPA-I1th5A0.1490.6201.135threading_1-----------------------------MLELNEENVEKVLNEIRPYLAGTGGLMIKGP-----IVKVRLTGPAAVVRTVRIAVSKKLREKSIQIVQLLS-------
2PPA-I2c1gA30.1080.6021.083threading_2-----------------------------TLDQLFSDASKAKEQLIKELTSFWNFDYKDSQIILYEIALPVSQSSYLLEKDAALYQSYFDKKHQ--------------
3PPA-I3canA20.1300.6391.060threading_3----------------------YYIRIPLIEGVNAD--EKNIKLSAEFLASLPRH-------PEIINLLPYHDKQTPSEEVQQQCIQILTDYGLKATIGG--------
4PPA-I1j27A0.1010.8241.046threading_4-------------------MKAYLGLYTARPARSLKEKRALIKPALERLKARFPVSAARLYGLDAWGFTLLGNDPAWVEETMRAAARFLAEAGGFQVALEEFRLEAFE
5MUSTER1dnpA10.1210.8430.681threading_5MSPRQAELINAQLNQIALAEKG--IPLLFREVDDFVASVEIVKQVCAEN---------------VTHLFYNYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAV
6SPARKS3ai7a0.1940.9070.741threading_6LSRISDEELHEFFHG-----MGYEPYEFVFDDEDHMSIHRRFAELWETIWDEATAQTDNVHRPFYPMLIFRTPKGWTTEAHFEVLKNWLESYKPE-----ELFDANGA
7PROSPECT21ykgA0.1080.9440.603threading_7IQTGNARRVAEALR-DDLLAAKLNVKLVNAGDYKFKQIASEAVALHKFLFSKKAP---KLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGE--RLLDRVDADVE
8PPA-I1u02A10.0860.6480.989threading_8---------------------------------FLGVFDRIYEDTRSWVSDFPGLRIYRKNL----AVLYHLGLGADKPKLRSRIEEIARIFGV-ETYYGKIIELRVP
9HHPRED-l2qvt_A0.2860.1940.728threading_9--------------------------------------------------------------------------------------GYTRFRPTASVTLSGLVNVKW-
10HHPRED-g3qd7_X0.1520.8520.627threading_10RREGLQHGVLDKLRSGKY---PQQASLNLLR-QPVEECRKMVFSFIQQALADGLLIIHGKGRD------------DKSNIVRSYVARWLTEFDVQAYCTALPHHGGSG

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.700 to 1hzdA
SCOP code=c.14.1.3
TM-score=0.629 to 1th5A
SCOP code=d.52.8.1
TM-score=0.586 to 2c1gA
SCOP code=c.6.2.3
TM-score=0.502 to 1je3A
SCOP code=d.68.3.3
TM-score=0.756 to 1j27A
SCOP code=d.58.50.1