Template-based Modeling Results for YGDI_ECOLI


  Submitted Primary Sequence

>Length 75
MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQQINRTDVKEMVELDQ
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--------10--------20--------30--------40--------50--------60--------70
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQQINRTDVKEMVELDQ
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQQINRTDVKEMVELDQ
443000100000000001201122100102212100122313224311001021341222102421032123234
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQQINRTDVKEMVELDQ
1MUSTER2rd1B0.4230.6932.417threading_1----------------------TTNYVTTKNGQTIVTQGKPQLDKETGT-SYTDQEGNQREINSNDVAQLIKADL
2SPARKS2jn0a0.5600.6672.494threading_2-----------------------DYVMATKDGRMILTDGKPEIDDDTGLVSYHDQQGNAMQINRDDVSQIIER--
3PROSPECT22k57A0.3090.7331.143threading_3M--------------------ASPTVITLNDGREIQAVDTPKYDEESGFYEFKQLDGKQTRINKDQVRTVKDLLE
4PPA-I2rd1B0.4230.6933.315threading_4----------------------TTNYVTTKNGQTIVTQGKPQLDKETGT-SYTDQEGNQREINSNDVAQLIKADL
5HHPRED-l2rd1_A0.5000.6674.677threading_5----------------------TNYV-TTKNGQTIVTQGKPQLDKETG-TSYTDQEGNQREINSNDVAQLIKAD-
6HHPRED-g2rd1_A0.4900.6803.729threading_6----------------------TNYV-TTKNGQTIVTQGKPQLDKETG-TSYTDQEGNQREINSNDVAQLIKADL
7SP32jn0a0.5600.6672.411threading_7-----------------------DYVMATKDGRMILTDGKPEIDDDTGLVSYHDQQGNAMQINRDDVSQIIER--
8SAM-T993bduA0.6470.6802.882threading_8--------------------SS-NYVLHTNDGRTIVAEGKPKVDDETG-ISYTDAYGQQQQINRDNVKEAKGK--
9MUSTER2ra2B0.7550.7072.393threading_9---------------------SGPNYVHTNDGRSIVTDGKPQTDNDTG-ISYKDANGNKQQINRTDVKEVALLEH
10SPARKS3bdua0.6470.6802.278threading_10---------------------SSNYVLHTNDGRTIVAEGKPKVDDETG-ISYTDAYGQQQQINRDNVKEAKGK--

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.756 to 2rd1B
SCOP code=b.38.1.6
TM-score=0.750 to 2ra2B
SCOP code=b.38.1.6
TM-score=0.625 to 2k57A
SCOP code=b.38.1.6
TM-score=0.845 to 2k57A
SCOP code=b.38.1.6
TM-score=0.756 to 2rd1B
SCOP code=b.38.1.6