Template-based Modeling Results for YGCO_ECOLI


  Submitted Primary Sequence

>Length 86
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
CCCCCCCCCCCCCCEEEECCCCCCCCCCHHHEECCCCEEEECCCCCEEEECCCCCCCCCCEEECCCCCCEEEECCCCCCCCEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
54223212321310000022212412122001001010010233130200031011001010102321202020122220110224
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
1MUSTER2gmhA0.2530.9651.917threading_1VALS-GTNHEHDQPHLTLKDDNLSIYDGPEQRFCPAGVYEFVPLERLQINAQNCVHCKTCDIKDPS-QNINWVVPEGGGGPAY-NG
2SPARKS2gmha0.2650.9653.642threading_2VALS-GTNHEHDQPHLTLKDDSLSIYDGPEQRFCPAGVYEFVPLERLQINAQNCVHCKTCDIKD-PSQNINWVVPEGGGGPAY-NG
3PROSPECT22fug90.1861.0000.654threading_3YPDAPVALKPRFHGRHVLTGLEKCIGCSLCAAACPAYAIYVEPAENYEINMLRCIFCGLCEEACPTGAIVLGYDFEMAVKVGYVVG
4PPA-I1clfA0.2730.6403.329threading_4--------------AYKIADSCVSCGA--CASECPVNAISQ-GDSIFVIDADTCIDCGNCANVCPVGAPVQE--------------
5HHPRED-l2gmh_A0.2140.9772.330threading_5VALSGTNHEHDQPAHLTLKDDSVRNLDGPEQRFCPAGVYEFVQGFRLQINAQNCVHCKTCDIKDPSQNIN-WVVPEGGGGPAYNG-
6HHPRED-g2gmh_A0.2620.9778.540threading_6VALS-GTNHEHDQPHLTLKDDSVPIYDGPEQRFCPAGVYEFVPQFRLQINAQNCVHCKTCDIK-DPSQNINWVVPEGGGGPAYNGM
7SP32gmha0.2650.9653.724threading_7VALS-GTNHEHDQPHLTLKDDSLSIYDGPEQRFCPAGVYEFVPLERLQINAQNCVHCKTCDIKD-PSQNINWVVPEGGGGPAY-NG
8SAM-T992gmhA0.2140.9773.062threading_8-ALSGTNHEHDQPAHLTLKDDNLSIYDGPEQRFCPAGVYEFVPGFRLQINAQNCVHCKTCDIKDPSQN-INWVVPEGGGGPAYNGM
9MUSTER1h98A0.1790.7791.143threading_9-------------PHVI--EPCIGVKDQSCVEVCPVECIYDGGDQ-FYIHPEECIDCGACVPACPVNAYPEEDVPEQWK--KL-AG
10SPARKS1r27b0.1290.9881.172threading_10DNIQKAMYSQFENTFMYLPRLCEHCLNPACVATCPSGIYKREEDGIVLIDQDKCRGWRMCITGC-PYKKIYFNWKSGFCYPRIEAG

  Predicted Tertiary Structure

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TM-score=0.605 to 1jb0C
SCOP code=d.58.1.2
TM-score=0.850 to 1bqxA
SCOP code=d.58.1.2
TM-score=0.589 to 1jb0C
SCOP code=d.58.1.2
TM-score=0.639 to 1durA
SCOP code=d.58.1.1
TM-score=0.778 to 1clfA
SCOP code=d.58.1.1