Template-based Modeling Results for YFGD_ECOLI

Submitted Primary Sequence

>Length 119
MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKILGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVANGKARIGRPPEQVLEIVG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKILGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVANGKARIGRPPEQVLEIVG
CCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCEEEECCCHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKILGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVANGKARIGRPPEQVLEIVG
54220101102402301100300452213020121132213021022004212231022012333320330322312111300020013213003100001212010023231013115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKILGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVANGKARIGRPPEQVLEIVG
1	MUSTER	3rdwA	0.670	0.966	3.826	threading_1	---DVTIYHNPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDDRGLTQDQLLQAMADNPKLIERPIVVTQGKARIGRPPEQVLEIL-
2	SPARKS	3rdwa	0.670	0.966	4.329	threading_2	---DVTIYHNPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDDRGLTQDQLLQAMADNPKLIERPIVVTQGKARIGRPPEQVLEIL-
3	PROSPECT2	3rdwA	0.670	0.966	2.620	threading_3	---DVTIYHNPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDDRGLTQDQLLQAMADNPKLIERPIVVTQGKARIGRPPEQVLEIL-
4	PPA-I	3rdwA	0.670	0.966	4.946	threading_4	---DVTIYHNPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDDRGLTQDQLLQAMADNPKLIERPIVVTQGKARIGRPPEQVLEIL-
5	HHPRED-l	1s3c_A	0.395	0.958	4.133	threading_5	---NITIYHNPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGI-SVRALLRKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDIL-
6	HHPRED-g	1s3c_A	0.391	0.966	4.109	threading_6	---NITIYHNPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGI-SVRALLRKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQ
7	SP3	3rdwa	0.670	0.966	4.600	threading_7	---DVTIYHNPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDDRGLTQDQLLQAMADNPKLIERPIVVTQGKARIGRPPEQVLEIL-
8	SAM-T99	3rdwA	0.670	0.966	4.283	threading_8	---DVTIYHNPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQLGFSDARQLMRTKEDLYKTLNLDDRGLTQDQLLQAMADNPKLIERPIVVTQGKARIGRPPEQVLEIL-
9	MUSTER	1z3eA	0.183	0.966	3.559	threading_9	M---VTLYTSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTED-GTDEIISTRSKVFQKLNVNVESMPLQDLYRLINEHPGLLRRPIIIDEKRLQVGYNEDEIRRFLP
10	SPARKS	1j9ba	0.395	0.958	3.646	threading_10	---NITIYHNP-AGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGI-SVRALLRKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQ

Predicted Tertiary Structure


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TM-score=0.827 to 1z3eA SCOP code=c.47.1.12	TM-score=0.827 to 1z3eA SCOP code=c.47.1.12	TM-score=0.827 to 1z3eA SCOP code=c.47.1.12	TM-score=0.827 to 1z3eA SCOP code=c.47.1.12	TM-score=0.827 to 1z3eA SCOP code=c.47.1.12