Template-based Modeling Results for YFFO_ECOLI

Submitted Primary Sequence

>Length 138
MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDDKQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDDKQ
CCCHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDDKQ
551312332201022123233431220421330022002001312101300222211012100101232220020012003100120031002002312222320121111030101001000312123223233445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDDKQ
1	MUSTER	3hefB	0.264	0.797	2.070	threading_1	-------------------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAIPDAAEVAKARLRVDTRKWALARMN---PRKYGDKVTNEL
2	SPARKS	3hefa	0.273	0.797	4.187	threading_2	-------------------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAIPDAAEVAKARLRVDTRKWALARM---NPRKYGDKVTNEL
3	PROSPECT2	3hefA	0.273	0.797	2.032	threading_3	-------------------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAIPDAAEVAKARLRVDTRKWA---LARMNPRKYGAIQIETS
4	PPA-I	3hefB	0.264	0.797	3.279	threading_4	-------------------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAIPDAAEVAKARLRVDTRKWALARMN---PRKYGDKVTNEL
5	HHPRED-l	3hef_A	0.308	0.754	6.850	threading_5	-------------------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAIPDAA--------EVAKARLRVDTRKWALARMNPYGDKV-
6	HHPRED-g	3hef_A	0.273	0.797	7.023	threading_6	-------------------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAIPDAAEVAKARLRVDTRKWA---LARMNPRKYGDKVTNEL
7	SP3	3hefa	0.273	0.797	4.023	threading_7	-------------------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAIPDAAEVAKARLRVDTRKWALARM---NPRKYGDKVTNEL
8	SAM-T99	3hefB	0.273	0.797	6.354	threading_8	-------------------------PSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADNAIPDAAEVAKARLRVDTRK---WALARMNPRKYGDKVTNEL
9	MUSTER	3bcgA1	0.126	0.804	0.729	threading_9	--------------------KQEAQETR--QHILDVALRLFSQSTSLGEIAKAAGV-TRGAIYWH----KDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVTERRRLLMEFHKCEFVGEMA
10	SPARKS	2elha	0.155	0.609	0.817	threading_10	SSG----SSGMNIR--MGTKGKRPL-RSLTPRDKIHAIQRIHDGESKASVARDIGVP-ESTLRGWCKNEDKLRFMSRQSATDNADALGDKMD----------------------------------------------

Predicted Tertiary Structure


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TM-score=0.493 to 4hb1A SCOP code=k.8.1.1	TM-score=0.493 to 4hb1A SCOP code=k.8.1.1	TM-score=0.480 to 4hb1A SCOP code=k.8.1.1	TM-score=0.504 to 4hb1A SCOP code=k.8.1.1	TM-score=0.493 to 4hb1A SCOP code=k.8.1.1