Template-based Modeling Results for YFDY_ECOLI

Submitted Primary Sequence

>Length 80
MINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCEEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR
22100100000000000100201200100020000000000010100002202210100000001000000000112357
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR
1	SPARKS	1wu0a	0.164	0.838	1.048	threading_1	LGVLAAAIAVGLGALGAGIGNGLIVSRTIEGIAELRPVLQTTMFIGVALVEALPIIGVVFSFIY------------LGR-
2	MUSTER	3rkoK	0.247	0.963	0.797	threading_2	MIPLQHGLILAAILFVGLTGLVINLLFMLIGLEIMINASALAFVVA-YWGQTDGQVMYILAISLAAAGLAL--LLQLHRR
3	SPARKS	1p58d	0.164	0.688	0.869	threading_3	-------------SSEGAWKHAQRIETWILRHPGFTIMAAILAYTIGTTHFQRVLIFILLTAIAPSMT------------
4	PROSPECT2	3g7dA1	0.100	0.875	0.578	threading_4	GKVSAGSVLDLFLARRAHTRTSAAEAAGVPPADLEAALR----------SPASETGLTVLRTLGRALGFDYRVLLPADDQ
5	PPA-I	1p49A1	0.294	0.637	0.905	threading_5	GFKRLVFLPLQIVGVTLLTLAALNCLGPLGVFFSLLFLAALILTLFLGFLH-----------------------------
6	HHPRED-l	2ksd_A	0.222	0.675	0.665	threading_6	SMLLALALVVLAIVVQMAHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLSR--------------------------
7	HHPRED-g	2qks_A	0.224	0.838	0.615	threading_7	LSDLFTTL----VDLK--WRWF--FVSLAVLFLLLNTAFATLYMLGSAPIANQFPFGGAFFFSVETL-----ATVGYGDM
8	SP3	1wu0a	0.171	0.875	0.722	threading_8	LGVLAAAIAVGLGALGAGIGNGLIVSRTIEGIARQPELRP---VLQ-----TTMFIGVALVEALPIIGVVFSFIY-LGR-
9	SAM-T99	2p97A	0.188	0.800	0.773	threading_9	LITGDLVRAYRAGGLEILPDEKLNKQKVVASVRRLAALAVLVGDGWSVFRDGRDRLKELVATLA----------------
10	MUSTER	2x2vA	0.182	0.825	0.770	threading_10	-AFLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQ-LRGTLQTLMFI----GVPLAEAVPIIAIVI-SLLILF-------

Predicted Tertiary Structure


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TM-score=0.352 to 2qswA SCOP code=d.58.18.13	TM-score=0.646 to 2g38C SCOP code=a.25.4.1	TM-score=0.548 to 2qypB SCOP code=a.64.1.1	TM-score=0.563 to 1z0jB SCOP code=a.2.19.1	TM-score=0.401 to 1mztA SCOP code=h.1.4.1