Template-based Modeling Results for YEIS_ECOLI

Submitted Primary Sequence

>Length 79
MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVYVWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR
1234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVYVWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEC
1234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVYVWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR
5541100000000000000022002002311032113223210001114210100000000000000000001000023
1234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVYVWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR
1	MUSTER	1c17L	0.178	0.924	1.063	threading_1	MENLNMLLYMAAAVMMGLAAIGAAIGIGI-LGGKFLEGARQP-----DLIPTQFFIVMGLVDAIPMIAVGLGLYVMFAV
2	SPARKS	1wu0a	0.132	0.861	1.018	threading_2	---MSLGVLAAAIAVGLGALGAGIGNGLI--VSRTIEGARQP-----ELRP-VLQTTMFIGVALALPIIGVVFSFIYLG
3	PPA-I	1p49A1	0.138	0.734	1.151	threading_3	-------FTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVP--------LGVFFSLLFLAALILTLFLGFLH------
4	PPA-I	2ra1A4	0.190	0.797	1.080	threading_4	---------LIYDITVAMKAREAQDAVKAGNLDKAK-AALDQVNQYVSKVTDAFKAELQKAAQDAKAAYEAAL------
5	PPA-I	1ijpA	0.147	0.949	1.024	threading_5	LNMDLLYMAAAVMMGLPAIGAAIGIGILGGKFLEGAARQPDLIPLLR----TQFFIVMGLVDAIAMIAVGLGLYVMFAV
6	MUSTER	1ijpA	0.181	0.911	0.952	threading_6	MENMDLLYMAAAVMMGLPAIGAAIGIGIL--GGKFLEGARQP-----DLIPTQFFIVMGLVDAIAMIAVGLGLYVMFAV
7	SPARKS	1c0va	0.149	0.937	0.928	threading_7	MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGARQP-----DLIPTQFFIVMGLVDAIPMIAVGLGLYVMFAV
8	PROSPECT2	1q77A	0.089	1.000	0.545	threading_8	SNAKVLLVLTAITYAVNFSSKKRIERRLREVWEKLTGSTEIPGVEYRIGPLSEEVKKFVPSAYLCKVIDGLNLASLIVK
9	PPA-I	1c17L	0.147	0.949	0.987	threading_9	LNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLR----TQFFIVMGLVDAIPMIAVGLGLYVMFAV
10	HHPRED-l	1qp6_A	0.286	0.443	0.835	threading_10	GE----------VEELEKKFKELWKGPRRGEIEELHKKFHELIKG----------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.683 to 1c17L SCOP code=f.17.1.1	TM-score=0.532 to 2qypB SCOP code=a.64.1.1	TM-score=0.712 to 1p49A SCOP code=c.76.1.2	TM-score=0.661 to 2d2sA SCOP code=a.118.17.2	TM-score=0.850 to 1ijpA SCOP code=f.17.1.1