Template-based Modeling Results for YEAR_ECOLI

Submitted Primary Sequence

>Length 119
MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK
CCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCEEEEEECCCCEEEEEEEEECHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK
55422311000220122233000100033033311320000100001010200011344323111000123221000203100101001420100010001111002111323223434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK
1	MUSTER	3bb6C	0.926	0.908	3.777	threading_1	-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSV--GAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEA-TDDTYFNIDFFVAPE-------VLEGAQQRK
2	SPARKS	3bb6a	0.952	0.882	4.496	threading_2	-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVH-GAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIE-ATDDTYFNIDFFVAPEVLEGA-----------
3	PROSPECT2	3bb6A	0.943	0.882	1.985	threading_3	L-QIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSV-HGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIE-ATDDTYFNIDFFVAPE-----------VLEGA
4	PPA-I	3bb6C	0.917	0.916	8.610	threading_4	-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVH-GAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEA-TDDTYFNIDFFVAPE-------VLEGAQQRK
5	HHPRED-l	3bb6_A	1.000	0.882	7.316	threading_5	-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSV-HGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEA-TDDTYFNIDFFVAPEVL-EGA----------
6	HHPRED-g	3bb6_A	1.000	0.882	6.514	threading_6	-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSV-HGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEA-TDDTYFNIDFFVAPEVL-EGA----------
7	SP3	3bb6a	0.962	0.882	4.358	threading_7	-LQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVH-GAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIE-ATDDTYFNIDFFVAPE-VLEGA----------
8	SAM-T99	3m70A	0.239	0.916	5.455	threading_8	----KNELICYKQ-PVWTKDNLPQ-FQEKH---NTKVGTWGKLTVLKGKLKFY-ELTENGDVIAEHIFTPESHIPFVEPQAWHRVEALSDDLECTLGFYCKKEDYFSKKYNTTAIHGDV
9	MUSTER	3dl3E	0.387	0.891	3.641	threading_9	HLRIPKNWTIQRSTPFFTKDNVPEALLTHH---NTAVDVFGQICV--GVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL-SDDAQFNINFWSDQD-KSGKKFNTK------
10	SPARKS	3dl3a	0.411	0.798	4.184	threading_10	--RIPKNWTIQRSTPFFTKDNVPEALLTHH---NTAVDVFGQICVE-GVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL-SDDAQFNINFWSDQ-----------------

Predicted Tertiary Structure


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TM-score=0.885 to 3bb6C TM-score=0.924 to native SCOP code=b.82.2.13	TM-score=0.882 to 3bb6C TM-score=0.920 to native SCOP code=b.82.2.13	TM-score=0.840 to 3bb6C TM-score=0.875 to native SCOP code=b.82.2.13	TM-score=0.835 to 3bb6C TM-score=0.870 to native SCOP code=b.82.2.13	TM-score=0.887 to 3bb6C TM-score=0.926 to native SCOP code=b.82.2.13

Experimental Structure

Download 3bb6C

SCOP code=b.82.2.13