Template-based Modeling Results for YDGU_ECOLI


  Submitted Primary Sequence

>Length 27
MVGRYRFEFILIILILCALITARFYLS
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--------10--------20
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVGRYRFEFILIILILCALITARFYLS
CCCEEEHHHHHHHHHHHHHHHHHHCCC
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Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MVGRYRFEFILIILILCALITARFYLS
531201110000000000000021223
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Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMVGRYRFEFILIILILCALITARFYLS
1MUSTER2wseI0.2690.9631.626threading_1MINLPSL-FVLVGLLFPAVAMASLFLH
2SPARKS1jb0x0.2400.9262.328threading_2--PTYAFTFWAVLLLAINFLVAAYYFA
3PROSPECT22x48A0.2591.0000.464threading_3MVQGVRYEDDLVSVAIANALVRRYLES
4PPA-I2wseI0.2221.0001.328threading_4MINLPSLFVPLVGLLFPAVAMASLFLH
5HHPRED-l1qf8_A0.3200.9260.618threading_5QVPHNQSDLIQAAE-LYGLIHARYIL-
6HHPRED-g1qf8_A0.3850.9630.473threading_6QVPHYRSDLIQAAE-LYGLIHARYILT
7SP31jb0x0.2400.9261.474threading_7--PTYAFTFWAVLLLAINFLVAAYYFA
8SAM-T993llwA10.3331.0001.109threading_8SLGGKRFRPKLFLAVLCALVGQKDYSN
9MUSTER1spfA0.1481.0001.555threading_9PVNLKRLLVVVVVVVLVVVVIVGALLM
10SPARKS2ww9c0.1430.7781.878threading_10-----RVDSLVVLFLSVGFIFSVIAL-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.519 to 1jb0I
SCOP code=f.23.17.1
TM-score=0.587 to 1r7gA
SCOP code=j.35.1.1
TM-score=0.319 to 1elwA
SCOP code=a.118.8.1
TM-score=0.496 to 1jb0I
SCOP code=f.23.17.1
TM-score=0.487 to 1p71A
SCOP code=a.55.1.1