Template-based Modeling Results for YDFB_ECOLI


  Submitted Primary Sequence

>Length 42
MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
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--------10--------20--------30--------40
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
551321022002200210130241021220121122224334
123456789012345678901234567890123456789012
--------10--------20--------30--------40
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDFDTIMEKAYEEYFEGLAEGEEALSFSEFKQALSSSAKSNG
1MUSTER1usdA0.2160.8811.134threading_1SDLQRVKQELMEEVKKELQKVKEEI-IEAFVQELRKRG----
2PPA-I1usdA0.2160.8811.017threading_2SDLQRVKQELMEEVKKELQKVKEEI-IEAFVQELRKRG----
3MUSTER2ga8A20.1670.8571.134threading_3IDYEATEERVAKRHLQS------VTTIAEGREKFRSNDLLNG
4MUSTER1tdpA10.2440.9761.104threading_4MDSQTLYLNLSEAYKDPEVKANEFL-SKLVVQCAGKLTASNS
5MUSTER1jqmB50.2190.7621.085threading_5L-VEVAADNIMLKYLE----GEE-PTEEELVAAIRKGT----
6MUSTER1zxaA0.2500.8571.049threading_6AKILMLKEERIKELEKRLSEKEEE--IQELKRKLHKCQ----
7MUSTER2oqqA0.2250.9521.027threading_7SAYLSELENRVKDLENKNSELEERLSLQNENQMLRHILKN--
8SPARKS3qf7d0.2570.8330.975threading_8LD----YFELFKEYLKKREENHEKL-LKILDELLDEVKKS--
9PROSPECT22qeuA10.0951.0000.564threading_9ATSQDILKQHAAHYESDGGLPEALVQLAEYPETFDAYSRRTT
10PPA-I1zxaA0.2500.8570.937threading_10AKILMLKEERIKELEKRLSEKEEE--IQELKRKLHKCQ----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.697 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.697 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.508 to 2g3qA
SCOP code=a.5.2.1
TM-score=0.843 to 1tdpA
SCOP code=a.29.8.1
TM-score=0.483 to 1jqmB
SCOP code=i.1.1.1