Template-based Modeling Results for YDDL_ECOLI


  Submitted Primary Sequence

>Length 96
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL
CCCCHHHHHHHHHHHHCHHHEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL
552311010000000010100010023322200010101001002334433233210100020101022201000101010213333233242444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL
1MUSTER2ixxA0.6130.7812.149threading_1---------------------AEVYNKDGNKLDLYGKVDGLHYFSDDKSVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNAPESENNSWTRV
2SPARKS1hxxa0.5730.7812.680threading_2---------------------AEIYNKDGNKVDLYGKAVGLHYFSKGNGENGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQKTRL
3PROSPECT22kc0A10.1400.9690.644threading_3AG---LADALTAPLDHKDKGLQSLTLDQNEKLKLAAQGAEKTYGNGDTGKLKNDKVSRFDFIRQIEVDGQLITLESGEFQVYKQSHSQDSEHSGKM
4PPA-I1phoA10.5600.7814.271threading_4---------------------AEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTR
5HHPRED-l2j1n_A0.6080.7714.355threading_5---------------------AEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSTRV-
6HHPRED-g2j1n_A0.6000.7814.308threading_6---------------------AEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRV
7SP31hxxa0.5730.7812.318threading_7---------------------AEIYNKDGNKVDLYGKAVGLHYFSKGNGENGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQKTRL
8SAM-T991phoA10.6030.7084.220threading_8---------------------AEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESD-------
9MUSTER1phoA0.5600.7812.090threading_9---------------------AEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDAQQKTRL
10SPARKS1e54a0.1790.6981.327threading_10-----------------------------SSVTLFGIVDTNVAYVNKDAATSGASTSRLGLRGTEDLGGGLKAGFWLEGEIFGDDGNASGFNFKRR

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.686 to 1phoA
SCOP code=f.4.3.1
TM-score=0.720 to 1phoA
SCOP code=f.4.3.1
TM-score=0.446 to 1phoA
SCOP code=f.4.3.1
TM-score=0.405 to 2j44A
SCOP code=b.3.1.3
TM-score=0.720 to 1phoA
SCOP code=f.4.3.1