Template-based Modeling Results for YDCH_ECOLI

Submitted Primary Sequence

>Length 74
MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
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--------10--------20--------30--------40--------50--------60--------70

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
42230130023024312200100330140021014132332312323123023211201220030023224434
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV
1	MUSTER	1zhcA	0.472	0.973	3.256	threading_1	MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQ--NASDAEVSHMKKQKLKLKDEIHSMIIEYREKQK
2	SPARKS	1zhca	0.472	0.973	3.443	threading_2	MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQ--NASDAEVSHMKKQKLKLKDEIHSMIIEYREKQK
3	PROSPECT2	1zhcA	0.472	0.973	1.412	threading_3	MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQ--NASDAEVSHMKKQKLKLKDEIHSMIIEYREKRA
4	PPA-I	1zhcA	0.472	0.973	6.971	threading_4	MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQ--QNASDAEVSHMKKQKLKLKDEIHSMIIEYREKQK
5	HHPRED-l	1zhc_A	0.479	0.959	6.802	threading_5	MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQ--QNASDAEVSHMKKQKLKLKDEIHSMIIEYREKQ-
6	HHPRED-g	1zhc_A	0.472	0.973	4.934	threading_6	MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQ--QNASDAEVSHMKKQKLKLKDEIHSMIIEYREKQK
7	SP3	1zhca	0.472	0.973	1.933	threading_7	MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQ--NASDAEVSHMKKQKLKLKDEIHSMIIEYREKQK
8	SAM-T99	1zhcA	0.485	0.919	3.838	threading_8	MFHEFRDEISVLKANNPHFDKIFEKHNQLDDDIKTAEQQNA--SDAEVSHMKKQKLKLKDEIHSMIIEYR----
9	MUSTER	3d5d2	0.143	0.946	0.960	threading_9	MLSEVRKQLEEARKSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLTVLNEKRRQNA----
10	SPARKS	2wdi2	0.129	0.946	1.035	threading_10	KLSEVRKQLEEARKSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLTVLNEKRRQNA----

Predicted Tertiary Structure


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TM-score=0.650 to 2ibzH SCOP code=f.28.1.1	TM-score=0.659 to 1lrzA SCOP code=a.2.7.4	TM-score=0.659 to 1lrzA SCOP code=a.2.7.4	TM-score=0.630 to 1fyjA SCOP code=a.16.1.3	TM-score=0.637 to 1lrzA SCOP code=a.2.7.4