Template-based Modeling Results for YDAS_ECOLI

Submitted Primary Sequence

>Length 98
MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT
CCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT
55433210220022011021003202121100020041233011200110131131301032011202011012010021123132133222222344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKENYSFKQACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPAERCPAIERATRGEVLCEELRPDIDWSYLRRSACCSQNMSVKQLNDSNKSSFDHT
1	MUSTER	3bd1A	0.415	0.663	2.056	threading_1	MN----AIDIAINKLGSVSALAASLGVRQSAISNWRARG-RVPAERCIDIERVTNGAVICRELRPDV-FGA---------------------------
2	SPARKS	3bd1a	0.415	0.663	2.528	threading_2	MN----AIDIAINKLGSVSALAASLGVRQSAISNWRA-RGRVPAERCIDIERVTNGAVICRELRPDV-FGA---------------------------
3	PROSPECT2	3bd1A	0.415	0.663	1.264	threading_3	MN----AIDIAINKLGSVSALAASLGVRQSAISNWRAR-GRVPAERCIDIERVTNGAVICRELRPDVF----------------------------GA
4	PPA-I	3bd1A	0.400	0.663	3.323	threading_4	----MNAIDIAINKLGSVSALAASLGVRQSAISNWRAR-GRVPAERCIDIERVTNGAVICRELRPDVFGA----------------------------
5	HHPRED-l	1rzs_A	0.311	0.622	2.581	threading_5	MY-----KKDVIDHFGTQRAVAKALGISDAAVSQW--K-EVIPEKDAYRLEIVTAGALK---YQENA---Y-RQAA----------------------
6	HHPRED-g	1rzs_A	0.311	0.622	1.724	threading_6	MYK-----KDVIDHFGTQRAVAKALGISDAAVSQW---KEVIPEKDAYRLEIVTAGAL---KYQEN-----AYRQAA---------------------
7	SP3	3bd1a	0.415	0.663	2.559	threading_7	MN----AIDIAINKLGSVSALAASLGVRQSAISNWRAR-GRVPAERCIDIERVTNGAVICRELRPDV-FGA---------------------------
8	SAM-T99	3bd1A	0.426	0.622	2.859	threading_8	-----NAIDIAINKLGSVSALAASLGVRQSAISNWRAR-GRVPAERCIDIERVTNGAVICRELRPDV-------------------------------
9	MUSTER	3lfpA	0.174	0.878	1.540	threading_9	M---IRRLKDARLRAGSQEKLGVLAGIDSARMNQYEKGKHAPDFEMANRLAKVLK--IPVSYLYTP-------EDDLAQIILTWNELNEQERKRINFY
10	SPARKS	3omta	0.231	0.663	1.472	threading_10	RKIFNR-LKSVLAEKGTNLWLTETLDKNKTTVSKWCTNDVQPSLETLFDIAEALN--VDVRELIVSTK------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.593 to 1rzsA SCOP code=a.35.1.2	TM-score=0.589 to 1rzsA SCOP code=a.35.1.2	TM-score=0.601 to 1rzsA SCOP code=a.35.1.2	TM-score=0.601 to 1rzsA SCOP code=a.35.1.2	TM-score=0.597 to 1rzsA SCOP code=a.35.1.2