Template-based Modeling Results for YCIN_ECOLI

Submitted Primary Sequence

>Length 83
MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCEEEECCEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD
55433321333100310230022011113102022122222000010100013320112201001000200012013212235
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD
1	MUSTER	3m92A	0.911	0.952	3.994	threading_1	--KETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTA-KSTAVFNFKHLAHVLSEKYHLV-
2	SPARKS	3m92a	1.000	0.952	5.324	threading_2	--KETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFN-FKHLAHVLSEKYHLV-
3	PROSPECT2	3m92A	1.000	0.952	1.442	threading_3	--KETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFN-FKHLAHVLSEKYHLV-
4	PPA-I	3m92A	0.911	0.952	7.495	threading_4	--KETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTA-KSTAVFNFKHLAHVLSEKYHLV-
5	HHPRED-l	3m92_A	1.000	0.952	10.102	threading_5	--KETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFN-FKHLAHVLSEKYHLV-
6	HHPRED-g	3m92_A	1.000	0.952	7.811	threading_6	--KETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFN-FKHLAHVLSEKYHLV-
7	SP3	3m92a	1.000	0.952	2.655	threading_7	--KETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFN-FKHLAHVLSEKYHLV-
8	SAM-T99	3m92A	1.000	0.940	6.174	threading_8	--KETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFN-FKHLAHVLSEKYHL--
9	MUSTER	2fd5A1	0.186	0.843	0.727	threading_9	MSDKKTQ-TRARILGAATQALLER---AVEPSVGEVMGAAGL---VGGFY---AHFQS-KDALMLEAFEQLLGKRRE--LLGE
10	SPARKS	2fb0a	0.200	0.964	0.902	threading_10	VFVRVNETNREKAIEAAKELTACEEGCIAYDTFESSTRRD---VFICETWQNAEVLAAHEKTAHFAQYVGIIQELAEKLEKFE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.465 to 1mnsA SCOP code=c.1.11.2	TM-score=0.460 to 1b10A SCOP code=d.6.1.1	TM-score=0.460 to 1b10A SCOP code=d.6.1.1	TM-score=0.460 to 1b10A SCOP code=d.6.1.1	TM-score=0.465 to 1mnsA SCOP code=c.1.11.2