Template-based Modeling Results for YCIH_ECOLI

Submitted Primary Sequence

>Length 108
MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHHCCCEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
555342210101332323333223233432120201122335421100002003132210230012014101110002212010212122101200432212012235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
1	MUSTER	1d1rA	1.000	0.750	3.339	threading_1	---------------------------KGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
2	SPARKS	1d1ra	1.000	0.750	2.743	threading_2	---------------------------KGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
3	PROSPECT2	1d1ra	1.000	0.750	1.658	threading_3	---------------------------KGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
4	PPA-I	1d1rA	1.000	0.750	7.075	threading_4	---------------------------KGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
5	HHPRED-l	1d1r_A	1.000	0.741	7.536	threading_5	---------------------------KGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAG-
6	HHPRED-g	1d1r_A	1.000	0.750	6.274	threading_6	---------------------------KGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
7	SP3	1d1ra	1.000	0.750	3.007	threading_7	---------------------------KGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
8	SAM-T99	1d1rA	1.000	0.750	3.946	threading_8	---------------------------KGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG
9	MUSTER	2xzmF	0.200	0.741	2.262	threading_9	--------------------------DDFQTHIHIRVE-QRRGRKCFTTVEGIP-PEFDYEKIMKYWKKWLSCNATIVEEVIKLNGDHRNQIQQFLSEEGINITIHGI
10	SPARKS	2xzmf	0.200	0.741	1.980	threading_10	--------------------------DDFQTHIHIRVEQR-RGRKCFTTVEGIP-PEFDYEKIMKYWKKWLSCNATIVEEVIKLNGDHRNQIQQFLSEEGINITIHGI

Predicted Tertiary Structure


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TM-score=0.857 to 1d1rA SCOP code=d.64.1.1	TM-score=0.857 to 1d1rA SCOP code=d.64.1.1	TM-score=0.857 to 1d1rA SCOP code=d.64.1.1	TM-score=0.857 to 1d1rA SCOP code=d.64.1.1	TM-score=0.857 to 1d1rA SCOP code=d.64.1.1