Template-based Modeling Results for YCIA_ECOLI

Submitted Primary Sequence

>Length 132
MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAVDPEGKPRALPVE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAVDPEGKPRALPVE
CCCCCCCCCCEEEEEEECCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECEECCCCEEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCCEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAVDPEGKPRALPVE
553333233110101000122101110100000001000100000012003220000102201012102211000020200111310010101010221334321222200200000000144222322235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAVDPEGKPRALPVE
1	MUSTER	1yliB	0.652	1.000	3.129	threading_1	TDKNGRQSKGVLLLRTLAMPSDTNANGDIFGGWIMSQMDMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPRE
2	SPARKS	3d6la	0.405	0.955	4.272	threading_2	------RDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAARELSPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSVTRDGKKNPISEE
3	PROSPECT2	3d6lA	0.405	0.955	2.655	threading_3	------RDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAARELSPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSVTRDGKKNPISEE
4	PPA-I	3d6lA	0.405	0.955	4.120	threading_4	------RDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAARELSPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSVTRDGKKNPISEE
5	HHPRED-l	3bjk_A	0.677	0.939	3.148	threading_5	-------SKGVLLLRTLAMPSDTNANGDIFGGWIMSQMAMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPR-
6	HHPRED-g	3bjk_A	0.680	0.947	3.089	threading_6	-------SKGVLLLRTLAMPSDTNANGDIFGGWIMSQMAMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPRE
7	SP3	1nnga	0.677	0.962	4.223	threading_7	-----RQSKGVLLLRTLAMPSDTNANGDIFGGWIMSQMDMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPRE
8	SAM-T99	1yliB	0.652	1.000	4.758	threading_8	TDKNGRQSKGVLLLRTLAMPSDTNANGDIFGGWIMSQMDMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPRE
9	MUSTER	3d6lA	0.405	0.955	2.955	threading_9	------RDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAARELSPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSVTRDGKKNPISEE
10	SPARKS	1nnga	0.677	0.962	4.234	threading_10	-----RQSKGVLLLRTLAMPSDTNANGDIFGGWIMSQMDMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAVDNNGRSRTIPRE

Predicted Tertiary Structure


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TM-score=0.944 to 1yliB SCOP code=d.38.1.1	TM-score=0.823 to 2gvhB SCOP code=d.38.1.1	TM-score=0.825 to 2gvhB SCOP code=d.38.1.1	TM-score=0.825 to 2gvhB SCOP code=d.38.1.1	TM-score=0.825 to 2gvhB SCOP code=d.38.1.1