Template-based Modeling Results for YCHN_ECOLI

Submitted Primary Sequence

>Length 117
MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHCCCCCEECCHHHHHHHHHHCCCEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF
521000001211211210100010010023342301010000010000013223123122022002101333010100000022230222201310200202100200120211021
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF
1	MUSTER	1jx7A	1.000	0.966	3.042	threading_1	-QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFL--DAVTAGLRGQKPGEGYNIQQ-LEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF
2	SPARKS	1jx7a	1.000	0.974	3.160	threading_2	-QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFL-SDAVTAGLRGQKPGEGYNIQQ-LEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF
3	PROSPECT2	2hy5B	0.183	0.983	2.091	threading_3	VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQ--DVCVLFLDDGVYQLTRGQDTKGMKNFSPTYRTLGDYEVRIYVDRDSLEARGLTQDDLVEIAFEDDSARVSELMNESDAVFSF
4	PPA-I	1jx7A	0.939	0.974	4.395	threading_4	-QKIVIVANGAPYGSESLFNSLRLAIALREQESNL-DLRLFLSDAVTAGLRGQKPGEGYNI-QQLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF
5	HHPRED-l	1jx7_A	1.000	0.966	4.811	threading_5	-QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFL-SDAVTAGLRGQKPGEGYNIQQ-LEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLT-
6	HHPRED-g	2d1p_A	0.235	0.983	4.238	threading_6	MR-FAIVVTGPAYGTQQASSAFQFAQALIADGHELS-SVFFYREGVYNANQLTSPASDFDLVRAWQQLNQHGVALNICVAAALRRGVVDENLQQGFTLSGLGALAEASLTCDRVVQF
7	SP3	1jx7a	0.982	0.974	3.729	threading_7	-QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLS-DAVTAGLRGQKPGEGYNI-QQLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF
8	SAM-T99	1jx7A	0.991	0.974	3.537	threading_8	-QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFL-SDAVTAGLRGQKPGEGYNIQ-QLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF
9	MUSTER	2d1pB	0.235	0.983	2.574	threading_9	MKRIAFVFSTAPHGTAAGREGLDALLATSA--LTDDLAVFFIADGVFQLLPGQKPDAARDYIATFKLLGLYDIQCWVCAASLRERGLDPQPFVVEATPLEADALRRELANYDVILRF
10	SPARKS	2d1pa	0.252	0.983	3.058	threading_10	M-RFAIVVTGPAYGTQQASSAFQFAQALIADGHEL-SSVFFYREGVYNANQLTSPASDFDLVRAWQQLNAQGVALNICVAAALRRGVASSNLQQGFTLSGLGALAEASLTCDRVVQF

Predicted Tertiary Structure


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TM-score=0.984 to 1jx7A TM-score=0.997 to native SCOP code=c.114.1.1	TM-score=0.978 to 1jx7A TM-score=0.991 to native SCOP code=c.114.1.1	TM-score=0.984 to 1jx7A TM-score=0.997 to native SCOP code=c.114.1.1	TM-score=0.875 to 2hybE TM-score=0.800 to native SCOP code=c.114.1.1	TM-score=0.978 to 1jx7A TM-score=0.991 to native SCOP code=c.114.1.1

Experimental Structure

Download 1jx7A

SCOP code=c.114.1.1