Template-based Modeling Results for YCHH_ECOLI

Submitted Primary Sequence

>Length 92
MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS
55232011100000000000000000110022013130121001010000000000000104111223001010002101330332334434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS
1	PPA-I	2ksdA	0.125	0.783	1.334	threading_1	LGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSR--------------------
2	PPA-I	3hc7A2	0.167	0.652	1.292	threading_2	DLHEYEVAIGRIVMKASGFI---GGRDSVVAQLIELGQRPITEGIALAGAIIDALTFFARSRM-----------------------------
3	PPA-I	1p49A1	0.143	0.609	1.221	threading_3	----FTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPVFFSLLFLAALILTLFLGFLH--------------------------------
4	PPA-I	1h2sB	0.222	0.587	1.031	threading_4	---------GAVFIFVGLTVLFGAIAYGEVTAAAATGDAAAVSAILGLIILLGINLGLVAATL-----------------------------
5	MUSTER	1k8qA	0.132	0.989	0.726	threading_5	PHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPVQNVLHWSQAVKSGKFQAFDWGSPVQNM-MHYHQSMPPYYN
6	SPARKS	2b8ia	0.147	0.815	0.943	threading_6	IRPYMKALIYETLVNLANPEQHATIRQNLYEQ---LDLP----FDKQLALYAGALGPASSGKLENHEAISNAVDSVVQLLEI----------
7	PROSPECT2	1w09A	0.120	0.902	0.600	threading_7	LLKANKDLISAGLK---------EFSVLLNQQVFNDPLVSEEDMVTVVEDWMNFYINYYRQQVTGEPQERDKALLANPFLAKYRDFLKSHEL
8	PPA-I	3kkcA2	0.192	0.848	0.995	threading_8	QDSIATLLLSDPYFLLRFRSELEHDVYPRLREETKVDIPEDFLKQFLLSSFIETLKWWLHQRQKTVEDLLKYYLTVER--------------
9	HHPRED-l	3cjx_A	0.184	0.946	0.676	threading_9	PLHFH-TISGCWYYTEGQKQTAGCYLYEPGGSIHQFNTPRDNEQTEVIF-LSGCNVNFT--QDGTYLGLSDAGVIKNWVDRAIREQDNGRY-
10	HHPRED-g	3aqp_A	0.194	0.674	0.773	threading_10	LRHLPLVTLSRTVM-TSLTTLLPILALLFLGGLRDFALAIFVFVGTYSSIYVVSALV---------------VAWKNR--------------

Predicted Tertiary Structure


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TM-score=0.337 to 1avzB SCOP code=d.102.1.1	TM-score=0.494 to 2bo3A SCOP code=a.292.1.1	TM-score=0.511 to 1fjlA SCOP code=a.4.1.1	TM-score=0.657 to 1p49A SCOP code=c.76.1.2	TM-score=0.525 to 1pd3A SCOP code=a.30.3.1