Template-based Modeling Results for YCGX_ECOLI

Submitted Primary Sequence

>Length 134
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEEEEECCCEEEEEECCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCEEEECCCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI
54111102210221353330220011023130000000001210100022220010302321020222422110220022131330203200200120000100010221100000131200001213434334
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI
1	MUSTER	2hh8A	0.457	0.948	3.628	threading_1	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ------
2	SPARKS	2hh8a	0.457	0.948	3.968	threading_2	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ------
3	PROSPECT2	2hh8A	0.457	0.948	2.363	threading_3	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ------
4	PPA-I	2hh8A	0.457	0.948	6.294	threading_4	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ------
5	HHPRED-l	2hh8_A	0.457	0.948	10.038	threading_5	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ------
6	HHPRED-g	2hh8_A	0.457	0.948	7.913	threading_6	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ------
7	SP3	2hh8a	0.457	0.948	2.146	threading_7	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ------
8	SAM-T99	2hh8A	0.457	0.948	6.290	threading_8	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ------
9	MUSTER	3db7A	0.117	0.828	0.747	threading_9	VTQPQLAQQFIKQHFSDSK-VALAKE-SDFLYKSYEVIFTNGNKVEFDKKGNWEEVDCKHT--SVPVAIIPAAIQKYVTTNYPDAK-----------LKIERYEVKLSNRTELKFDLKFNLIDIDN--------
10	SPARKS	3db7a	0.086	0.866	0.804	threading_10	VTQPQLAQQFIKQHFSDSKVA--LAKESDFLYKSYEVIFTNGNKVEFDKKGNWEEVDCKHTSVPVAIIP--AAIQKYVTTNYPDAKVLKI------ERDKKDYEVKLSNRTELKFDLKFNLIDIDN--------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.972 to 2hh8A SCOP code=d.358.1.1	TM-score=0.972 to 2hh8A SCOP code=d.358.1.1	TM-score=0.972 to 2hh8A SCOP code=d.358.1.1	TM-score=0.972 to 2hh8A SCOP code=d.358.1.1	TM-score=0.972 to 2hh8A SCOP code=d.358.1.1