Template-based Modeling Results for YCGI_ECOLI

Submitted Primary Sequence

>Length 147
MNTIHLRCLFRMNPLVWCLRADVAAELRSLRRYYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEXEPWLKAAVRKEFVDDNRVKVNNDGNFVNDLSGRRGIYQAAIKASFSSTFSGHLGVGYSHGAGVESPWNAVAGVNWSF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNTIHLRCLFRMNPLVWCLRADVAAELRSLRRYYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEXEPWLKAAVRKEFVDDNRVKVNNDGNFVNDLSGRRGIYQAAIKASFSSTFSGHLGVGYSHGAGVESPWNAVAGVNWSF
CCCEEEECCCEECCCCEEECHHEEEEEEECCCCEECCCCEEEECCCCCEEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCEEEECCCCCEECCCCCCEEEEEEEEEEEECCCEEEEEEEEEECCCCCCCCCEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNTIHLRCLFRMNPLVWCLRADVAAELRSLRRYYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEXEPWLKAAVRKEFVDDNRVKVNNDGNFVNDLSGRRGIYQAAIKASFSSTFSGHLGVGYSHGAGVESPWNAVAGVNWSF
543110202120232010111000000102442120111010212313001110001001202124212010001000111113312020133120112131110101000201012200000100112222132201010001032
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNTIHLRCLFRMNPLVWCLRADVAAELRSLRRYYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEXEPWLKAAVRKEFVDDNRVKVNNDGNFVNDLSGRRGIYQAAIKASFSSTFSGHLGVGYSHGAGVESPWNAVAGVNWSF
1	SPARKS	3slja	0.069	0.986	4.521	threading_1	SWYAGAEAGYRYTEDAWIEPQAELVYGSVSGKQFAWKDQLSMKDKDYNPLIGRTGVDVGKSFS-GKDWKTARAGLGYQFDLLANGETVLRDASKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF-
2	PROSPECT2	3qq2A	0.186	0.878	1.571	threading_2	DAGQQISNAYDQPNDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIALAGGNIVQPYARLGWTQEF------------------KSGRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF
3	PPA-I	3qq2A	0.109	0.871	4.240	threading_3	GAAWSLEGGRELPNDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIALAGGNIQPYARLGWTQEFKS------------------GRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF-
4	HHPRED-l	3slt_A	0.099	0.966	5.046	threading_4	YAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWDQGMHLKDKDYNPLIGRTGVDVGKSFSGK---DWKVTARAGLGYQFDANGETVLRDEKRIK-GEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYS-
5	HHPRED-g	3slt_A	0.112	0.973	4.980	threading_5	SWYAGAEAGYRYHVDAWIEPQAELVYGSVSGKQFAWDQGMHLKDKDYNPLIGRTGVDVGKSFSGK---DWKVTARAGLGYQFDANGETVLRGEKRIK-GEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
6	SP3	3slja	0.069	0.986	4.437	threading_6	SWYAGAEAGYRYTEDAWIEPQAELVYGSVSGKQFAWKDQLSMKDKDYNPLIGRTGVDVGKSFS-GKDWKTARAGLGYQFDLLANGETVLRDASKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF-
7	SAM-T99	3qq2A	0.194	0.878	6.010	threading_7	AWSLEGGRRFELPNDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIALAGGNIVQPYARLGWTQEFKSG------------------RVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF
8	SPARKS	3qq2a	0.125	0.871	4.426	threading_8	GAAWSLEGGRRFPNDWFAEPQAEVMLWRTSGKRYRASNGLRVKVDANTATLGRLGLRFGRRIALAGGNIQPYARLGWTQEFK------------------SGRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF-
9	PROSPECT2	2qomA	0.085	0.959	1.260	threading_9	NAGAEAGYRYHVTEDAWIEPQAELVYGS-----VSGKQFLSMKDKDYNPLIGRTGVDVGKSFS-GKDWKVTARAGLGYQFDLLANGETVLRDASGEKRIKGESRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
10	PPA-I	2qomB	0.069	0.980	3.733	threading_10	SWYAGAEAGYHVTEDAWIEPQAELVYGSVSGKQFAWKDGLSMKDKDYNPLIGRTGVDVGKSFS--GKWKTARAGLGYQFDLLANGETVLRDASGEKRIKGESRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF-

Predicted Tertiary Structure


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TM-score=0.532 to 1phoA SCOP code=f.4.3.1	TM-score=0.559 to 1phoA SCOP code=f.4.3.1	TM-score=0.456 to 1phoA SCOP code=f.4.3.1	TM-score=0.544 to 1phoA SCOP code=f.4.3.1	TM-score=0.538 to 1phoA SCOP code=f.4.3.1