Template-based Modeling Results for YCFL_ECOLI

Submitted Primary Sequence

>Length 125
MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPFLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPFLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL
CCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCHHHHCCEEEECCEEEEECCEEEEEEEEEECCCCCEEEEEEEEEECCCCCEECCCCCCCEEEECCCCEEEEEEECCCCCCEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPFLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL
44200000000000001103233302023322001211100220102202022234111000102134442020001000012400202223321201021311020111122231220100012
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPFLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL
1	MUSTER	3o0lA	0.126	0.824	2.603	threading_1	--------------------HTGGI-ISSTGEVRVDNGSFHSDVDVSAVTTQAEAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVWKSLKLHGKQQ-QVTALSPNATAVRCELYVRE
2	SPARKS	3o0la	0.126	0.824	3.377	threading_2	--------------------HTGGI-ISSTGEVRVDNGSFHSDVDVSAVTTQAEAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGSWKSLKLHGKQQ-QVTALSPNATAVRCELYVRE
3	PROSPECT2	3o0lA	0.115	0.832	1.641	threading_3	---------------------HTGGIISSTGEVRVDNGSFHSDVDVSAVTTQAEAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVSWKSLKLHGKQQQVTALSPNATAVRCELYVIS
4	PPA-I	3o0lA	0.126	0.824	4.375	threading_4	---------------------HTGGIISSTGEVRVDNGSFHSDVDVSAVTTQAEAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGSWKSLKLHGKQQ-QVTALSPNATAVRCELYVRE
5	HHPRED-l	3o0l_A	0.127	0.816	7.099	threading_5	--------------------HTGGI-ISSTGEVRVDNGSFHSDVDVSAVTTQAEAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGSWKSLKLHGKQQ-QVTALSPNATAVRCELYVR-
6	HHPRED-g	3o0l_A	0.126	0.824	6.518	threading_6	--------------------HTGGI-ISSTGEVRVDNGSFHSDVDVSAVTTQAEAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGSWKSLKLHGKQQ-QVTALSPNATAVRCELYVRE
7	SP3	3o0la	0.126	0.824	1.623	threading_7	--------------------HTGGI-ISSTGEVRVDNGSFHSDVDVSAVTTQAEAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVWKSLKLHGKQQ-QVTALSPNATAVRCELYVRE
8	SAM-T99	3o0lA	0.117	0.824	2.855	threading_8	---------------------HTGGIISSTGEVRVDNGSFHSDVDVSAVTTQAEAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVSWKLKLHGKQQ-QVTALSPNATAVRCELYVRE
9	MUSTER	1rw9A4	0.132	0.848	0.789	threading_9	NKYSVI-------------RNDATVEFKTAKTTAATKPGMAGDLGASGPVFSRHGN--ELSLAVSEPTQKAAGLTLTLP--EGTWSSV--LEGAGTLGTDADGRSTLTLDTTGLSGKTKLIKLKR
10	SPARKS	2y1wa	0.128	1.000	0.694	threading_10	FTDEQLYMEQFTKANFWYQPSFHGVDLSARQPVVFDIRILMAKKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDSIMLSTAPTEPLSPLFAKAGDSGTCLLIANKRQSYDISIVAQV

Predicted Tertiary Structure


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TM-score=0.582 to 1l9mB SCOP code=b.1.18.9	TM-score=0.564 to 1g0dA SCOP code=b.1.18.9	TM-score=0.586 to 1l9mB SCOP code=b.1.18.9	TM-score=0.573 to 1f13A SCOP code=b.1.18.9	TM-score=0.582 to 1l9mB SCOP code=b.1.18.9