Template-based Modeling Results for YCEK_ECOLI

Submitted Primary Sequence

>Length 75
MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDSAWRYVTILDLPFSLVFDTLLLPIDIHHGPYE
123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDSAWRYVTILDLPFSLVFDTLLLPIDIHHGPYE
CCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDSAWRYVTILDLPFSLVFDTLLLPIDIHHGPYE
442101001000111000012201223121121110021104211120000010000000000000011221234
123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDSAWRYVTILDLPFSLVFDTLLLPIDIHHGPYE
1	SPARKS	3dl8e	0.194	0.827	1.273	threading_1	IIAVVLIISTLLQKGRGDVGAAFGGGMGQSIFGVGGVETILTKATYW-LGALFLVLALLLSVI------------
2	PPA-I	3dinE	0.108	0.867	1.074	threading_2	HTIISVALIYMVQVQMSKFSELGGAFGSGGLHTVFGRRKGLDTGGKITLVLSVLFFVSCVVTAFV----------
3	HHPRED-g	1fft_B	0.196	0.680	1.089	threading_3	-----------------S--ALLDPK-G----QIGLEQRSLILTAFGLMLIVVVPILIIIFLAVLTWKTTHAPSK
4	MUSTER	3dl8E	0.194	0.827	0.931	threading_4	IIAVVLIISTLLQKGRGDVGAAFGGGMGQSIFGVGGVETILTKATYW-LGALFLVLALLLSVI------------
5	SPARKS	1b0na2	0.121	0.773	0.874	threading_5	IKQYRKEKGY-SL---SELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSVLDVSVHTLLDT-------------
6	PROSPECT2	1ycc_	0.107	1.000	0.566	threading_6	TAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANVLWDENNMSEYLTNPKKYIPGTCE
7	PPA-I	2kseA	0.206	0.907	0.894	threading_7	LRVRLTLIFLILASVTWLLSSFVAWKQTTDNWEY------REDMALAIVAGQLIPWLVALPIMLIIMMVLLGRE-
8	HHPRED-l	2f2f_C	0.200	0.533	0.810	threading_8	-------------------------DPT----TYPDVELNYLSTHWE---LIDYKGTLVQAKCFAFPGE--GTC-
9	HHPRED-g	3u52_E	0.204	0.653	0.718	threading_9	--------------------SVNALY------DYKFEPKDKVEVYWALLVQPGMTFSALVDEILKPATAAHPDSA
10	SP3	3dl8e	0.194	0.827	0.641	threading_10	IIAVVLIISTLLQKGRGDVGAAFGGGMGQSIFGVGGVETILTKATY-WLGALFLVLALLLSVI------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.538 to 1lrzA SCOP code=a.2.7.4	TM-score=0.572 to 1grjA SCOP code=a.2.1.1	TM-score=0.461 to 1ufiC SCOP code=a.30.4.1	TM-score=0.546 to 1lrzA SCOP code=a.2.7.4	TM-score=0.583 to 2c2lA SCOP code=a.118.8.1