Template-based Modeling Results for YCCF_ECOLI

Submitted Primary Sequence

>Length 148
MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEITKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQCISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEITKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQCISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEITKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQCISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE
4400100000000000000010000000000001010010001000000011012001132112223322110000010000110000200011000000000000001000000100001001101200223212012222234335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEITKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQCISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE
1	PPA-I	2ahzA	0.176	0.615	1.093	threading_1	LLTLKRMLRACLRLFVLTILTLISGTIFYSTVEGLPIDALYFSVVTLTTVGDG-------NFSP------QTDFGKIFTILYIFI--GIGLVFGFIHKLAVNVQ---LP---------------------------------------
2	MUSTER	3b4rA1	0.145	0.743	0.675	threading_2	ITFILFLVVIIGLSIM-SIFWAVLFILLFVSVVGKKYG---VKIEKILLLPIG--VAMMDKIPKEGE-----RIGIAGPLVSFIIGIVLLIVSQF-FDININGYPLLYTLSLLNLMLGGFNL--------------------------
3	SPARKS	1lssa	0.122	0.777	0.917	threading_3	---------------------------MYIIIAGIRVGYTLAKSLSEK----GHDIVLIDKASAEIDALVINGDCTKIKTLEDAADMYIAVTGKEEVNLMSSLLAYGINIARISEIEYKDVFERLGDVVVSPELIAANYIEKLIER--
4	PROSPECT2	2p6pA1	0.084	0.966	0.826	threading_4	MRIL-----FVAAGSPATVFALAPLATAARVMAANQDMGPVVTGVGLPAVATTDRHFITTDREGRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWVGGTMSYVAPLLALHLGARQTWDAVDADGIHPGADAELRPELSELG
5	PPA-I	3b4rA1	0.116	0.757	0.889	threading_5	ITFILFLVVIIGLSIMNNSIFWAVLFILLFVSVVLHELGHSYVAKKYLLLPIGG-VAMMDKIPKE---------GELRIGIAGPLVSFIIGIVLLIVSQFFDININGYTLSLLNLMLGGFNL--------------------------
6	HHPRED-l	2kx2_A	0.189	0.500	0.630	threading_6	FGREDMGLNYVSGLDEELTEKLIERLDEGDLIITVFY--------EREYFPFGSEESKVKM------------ADFIA--------REEIEMMVFLSSVLED----------------------------------------------
7	HHPRED-g	1pff_A	0.190	0.709	0.679	threading_7	----------------SALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLY-------GCTHALFEHQL--RKFGV-------------EVDFIDM-AVPGNI---EKHLKPNT-RIVYFETPDIEAVKQARKQKD
8	SP3	3ky8a	0.154	0.919	0.689	threading_8	YFQGANIV-FIATGYIADLDWLHSGFVALERVDGL-VGRNTLDVLSFDCWPYSKPVFVTTEVPQGYEDKVKGKLVDIIADLNLYIDGGVTIQNFLKEDLIEVITRFGVPLELESLSFNVIKSEVVLDSLT------QTTYHRKR----
9	SAM-T99	1hjqA	0.108	0.939	0.733	threading_9	-SDINNLAWLYNYTLDSMNRFADAGIQVDIVSIGN-------EITQGLLWPLGKTNNWYNIARLLHSAAW-GVKDSRLNPKPKIMVHLDNGWNWDTQNWWYTNVLSQGPFEMSDFDMMGVSFYPFYSASATLDSLRRSLNNMVSRWGK
10	MUSTER	2p6pA1	0.133	0.966	0.673	threading_10	MR----ILFVAAGATVFALAPLATAARNAVVMAANQDMGPVVTGVGLPAVATTDLPIRITTDREGRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWLIVGGTMSYVAPLLALHL-VPQTWDAVDADGIHPGADAELRPELS

Predicted Tertiary Structure


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TM-score=0.675 to 1c9bA SCOP code=a.74.1.2	TM-score=0.482 to 1fioA SCOP code=a.47.2.1	TM-score=0.605 to 1tqgA SCOP code=a.24.10.3	TM-score=0.474 to 4hb1A SCOP code=k.8.1.1	TM-score=0.438 to 1ng6A SCOP code=a.182.1.1