Template-based Modeling Results for YCAR_ECOLI

Submitted Primary Sequence

>Length 60
MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESKS
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--------10--------20--------30--------40--------50--------60

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESKS
CCHHHHHHEECCCCCCCCEECCCCCEEECCCCCEEEECCCCCCCCCHHHCCCCCHHHCCC
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--------10--------20--------30--------40--------50--------60

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESKS
543300100001203140212533210004212000103320100022203222233244
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--------10--------20--------30--------40--------50--------60

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESKS
1	MUSTER	2jr6A	0.483	1.000	3.531	threading_1	MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYMLENEARPLSEEELKA
2	SPARKS	2jnya	0.424	0.983	3.792	threading_2	LDPQLLEVLACPKDKGPLRYLESEQLLVNERLNLAYRIDDGIPVLLIDEATEWTPNNLE-
3	PROSPECT2	2jnyA	0.424	0.983	1.222	threading_3	LDPQLLEVLACPKDKGPLRYLESEQLLVNERLNLAYRIDDGIPVLLIDEATEWTPNNLE-
4	PPA-I	2jnyA	0.424	0.983	8.562	threading_4	LDPQLLEVLACPKDKGPLRYLESEQLLVNERLNLAYRIDDGIPVLLIDEATEWTPNNLE-
5	HHPRED-l	2jr6_A	0.492	0.983	4.116	threading_5	MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYMLENEARPLSEEELK-
6	HHPRED-g	2js4_A	0.500	1.000	3.578	threading_6	MESRLLDILVCPVCKGRLEFQRAQAELVCNADRLAFPVRDGVPIMLEAEARSLDAEAPAQ
7	SP3	2jnya	0.424	0.983	3.917	threading_7	LDPQLLEVLACPKDKGPLRYLESEQLLVNERLNLAYRIDDGIPVLLIDEATEWTPNNLE-
8	SAM-T99	2jnyA	0.424	0.983	3.058	threading_8	LDPQLLEVLACPKDKGPLRYLESEQLLVNERLNLAYRIDDGIPVLLIDEATEWTPNNLE-
9	MUSTER	2jnyA	0.424	0.983	3.524	threading_9	LDPQLLEVLACPKDKGPLRYLESEQLLVNERLNLAYRIDDGIPVLLIDEATEWTPNNLE-
10	SPARKS	2kpia	0.426	0.900	3.480	threading_10	LEAGLLEILACPACHAPLEERDAELICTGQDCGLAYPVRDGIPVLLVDEARRPE------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.703 to 2pk7A SCOP code=b.171.1.1	TM-score=0.350 to 1ronA SCOP code=j.6.1.1	TM-score=0.914 to 2jnyA SCOP code=b.171.1.1	TM-score=0.931 to 2jnyA SCOP code=b.171.1.1	TM-score=0.931 to 2jnyA SCOP code=b.171.1.1