Template-based Modeling Results for YBJQ_ECOLI

Submitted Primary Sequence

>Length 107
MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR
CEEECCCCCCCEEEEEEEEEEEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCEEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR
20010132131110010000000100000211310010011012130210131033012200320021032120200000000031013310000000000002144
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR
1	MUSTER	1y2iA	0.981	0.972	3.008	threading_1	-QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGS--LVSVSGTAVKTRR
2	SPARKS	1y2ia	0.981	0.972	4.995	threading_2	-QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGS--LVSVSGTAVKTRR
3	PROSPECT2	1vr4A	0.544	0.963	1.847	threading_3	MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVRD--GMLMVAVSGTAVRI--
4	PPA-I	1vr4A	0.544	0.963	6.337	threading_4	MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVR--DGMLMVAVSGTAVRI--
5	HHPRED-l	1y2i_A	0.990	0.953	7.214	threading_5	-QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGS---VSVSGTAVKTR-
6	HHPRED-g	1y2i_A	0.990	0.963	6.718	threading_6	-QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGS---VSVSGTAVKTRR
7	SP3	1y2ia	0.962	0.972	5.262	threading_7	-QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQN--GSLVSVSGTAVKTRR
8	SAM-T99	1vr4A	0.544	0.963	5.002	threading_8	MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVRDG--MLMVAVSGTAVRI--
9	MUSTER	1vr4A	0.544	0.963	2.977	threading_9	MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVRDG--MLMVAVSGTAVRI--
10	SPARKS	3qkba	0.224	0.794	1.160	threading_10	I---TTEGINAG--YTIKDVVEATSSL---LASEDIDKY-------------NFDQLFDEAKQKLKKKADLLEGDGIIGLKYNTEVVEVNGAFLVVHGYGTVILID-

Predicted Tertiary Structure


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TM-score=0.956 to 1y2iA SCOP code=d.230.5.1	TM-score=0.955 to 1vr4A SCOP code=d.230.5.1	TM-score=0.956 to 1y2iA SCOP code=d.230.5.1	TM-score=0.944 to 1vr4A SCOP code=d.230.5.1	TM-score=0.955 to 1vr4A SCOP code=d.230.5.1