Template-based Modeling Results for YBIJ_ECOLI

Submitted Primary Sequence

>Length 86
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK
43101000000000000000100320222214512200100022211131012200210332302000001023312000101014
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK
1	MUSTER	2nocA	0.365	0.988	2.563	threading_1	MKTGYKVM-LGALAFVVTNVYAAEIMKDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYK
2	SPARKS	2jnaa	0.294	0.988	2.597	threading_2	MK-KRIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQISSPSDLREKLSELADAKGGKYYHIIAARHGPNFEAVAEVYN
3	PROSPECT2	2nocA	0.302	1.000	1.257	threading_3	MKTGYKVALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYK
4	PPA-I	2nocA	0.291	1.000	3.359	threading_4	MKTGYKVMLGFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYK
5	HHPRED-l	2jna_A	0.298	0.977	6.217	threading_5	MKK-RIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQISSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVY-
6	HHPRED-g	2jna_A	0.294	0.988	5.301	threading_6	MKK-RIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQISSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVYN
7	SP3	2jnaa	0.294	0.988	2.702	threading_7	MK-KRIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQISSPSDLREKLSELADAKGGKYYHIIAAREHGNFEAVAEVYN
8	SAM-T99	2nocA	0.318	0.988	3.218	threading_8	-MKTGYKVMLGALAFVVTNVYAAEIMKKTDFDKYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYK
9	MUSTER	2jnaA	0.294	0.988	2.552	threading_9	MKK-RIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQISSPSDLREKLSELADAKGGKYYHIIAAREGPNFEAVAEVYN
10	SPARKS	2noca	0.302	1.000	2.416	threading_10	MKTGYKVALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMSPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.731 to 2nocA SCOP code=d.230.6.1	TM-score=0.731 to 2nocA SCOP code=d.230.6.1	TM-score=0.640 to 2jnaA SCOP code=d.230.6.1	TM-score=0.803 to 2nocA SCOP code=d.230.6.1	TM-score=0.778 to 2nocA SCOP code=d.230.6.1