Template-based Modeling Results for YBFE_ECOLI

Submitted Primary Sequence

>Length 97
MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV
CCCHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV
5433322321010012233322342121123211211332213333443122010202230021022104234032120022001211222333224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV
1	HHPRED-l	2hza_A	0.326	0.474	1.298	threading_1	--------------------------------------------------QRVTITLDDDLLETLDSLSQRRGNNRSEAIRDILRSALAQEATQQH-
2	HHPRED-g	2hza_A	0.319	0.485	1.307	threading_2	--------------------------------------------------QRVTITLDDDLLETLDSLSQRRGNNRSEAIRDILRSALAQEATQQVL
3	HHPRED-l	2wvf_A	0.208	0.495	1.274	threading_3	------------------------------------------------SIIRFSVSLQQNLLDELDNRIIKNGSSRSELVRDMIREKLVEDNWAES-
4	HHPRED-g	2wvf_A	0.204	0.505	1.187	threading_4	------------------------------------------------SIIRFSVSLQQNLLDELDNRIIKNGSSRSELVRDMIREKLVEDNWAESL
5	HHPRED-l	2k5j_A	0.273	0.567	1.249	threading_5	------------------------MNSL-----------------AGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTAR-
6	HHPRED-g	2bj7_A	0.180	0.515	1.135	threading_6	-----------------------------------------------MELIRFSISIPSKLLEKFDQIIEEIGYNRSEAIRDLIRDFIIRHEWEVEV
7	HHPRED-l	2bj7_A	0.163	0.505	1.221	threading_7	-----------------------------------------------MELIRFSISIPSKLLEKFDQIIEEIGYNRSEAIRDLIRDFIIRHEWEVG-
8	HHPRED-l	3h87_C	0.205	0.454	1.038	threading_8	--------------------------------------------------SDVLIDIPDDVLASLDAIAARLGLSRTEYIRRRLAQDAQ--TARVT-
9	MUSTER	1z1gA	0.141	0.948	0.694	threading_9	TARINSNSVTLHSWLDRYEK-ILASRGIKQKTLINYSKIKAIRRG---PDAPLE-DITTKEIAALNGYIDEGKAASAKLIRSTLSDAFREAIAEGHI
10	SPARKS	3e5na	0.125	0.990	0.718	threading_10	LALAYDHKVECAVLGNAVVCGEVVVEIVI-PADIDAQTQQRIQQIAVQGMARVDVFLCADRISVYPKLWQASGLDYRGLITRLIELALERHTDDQLL

Predicted Tertiary Structure


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TM-score=0.508 to 1ea4F SCOP code=a.43.1.3	TM-score=0.473 to 2caxA SCOP code=a.43.1.4	TM-score=0.524 to 1x93A SCOP code=a.43.1.3	TM-score=0.474 to 1x93A SCOP code=a.43.1.3	TM-score=0.534 to 1ea4F SCOP code=a.43.1.3