Template-based Modeling Results for YBEB_ECOLI

Submitted Primary Sequence

>Length 105
MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS
CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCEEEEECCHHHHHHCCHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS
451320021002103423131000000323020000000010112210210022013102321221100202421100000000000000132014101123113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS
1	MUSTER	2id1A	0.373	0.971	2.985	threading_1	-EIQEISKLAIEALEDIKGKDIIELDTSKLTSLFQ-RIVATGDSNRQVKALANSVQVKLKEAGVDIVGSEGHESGEWVLVDAGDVVVHVL-PAVRDYYDIEALWG
2	SPARKS	2o5aa	0.347	0.962	4.287	threading_2	-SNQELLQLAVNAVDDKKAEQVVALN---KGISLDFFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLWP
3	PROSPECT2	2o5aA	0.337	0.962	2.217	threading_3	-SNQELLQLAVNAVDDKKAEQVVALNKGIS---LDFFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLWP
4	PPA-I	2o5aA	0.337	0.962	4.846	threading_4	-SNQELLQLAVNAVDDKKAEQVVALNK---GISLDFFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLWP
5	HHPRED-l	2id1_A	0.376	0.962	7.098	threading_5	-EIQEISKLAIEALEDIKGKDIIELDTSKLTSLFQR-IVATGDSNRQVKALANSVQVKLKEAGVDIVGSEGHESGEWVLVDAGDVVVHV-LPAVRDYYDIEALW-
6	HHPRED-g	2id1_A	0.373	0.971	5.437	threading_6	-EIQEISKLAIEALEDIKGKDIIELDTSKLTSLFQR-IVATGDSNRQVKALANSVQVKLKEAGVDIVGSEGHESGEWVLVDAGDVVVHV-LPAVRDYYDIEALWG
7	SP3	3upsa	0.366	0.962	4.609	threading_7	FD-PELLKLVTDSLDDDQALEIATIPLAGKSSIAD-YVIASGRSSRQVTA-AQKLADRIKAATGYVSKIEGLPAADWVLLDAGDIIIHLFRPEVRSFYNLER-WG
8	SAM-T99	2o5aA	0.350	0.952	4.674	threading_8	-SNQELLQLAVNAVDDKKAEQVVALN---KGISLDFFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLW-
9	MUSTER	2o5aA	0.347	0.962	2.917	threading_9	-SNQELLQLAVNAVDDKKAEQVVALN---KGISLDFFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLWP
10	SPARKS	3upsa	0.366	0.962	4.250	threading_10	FD-PELLKLVTDSLDDDQALEIATIPLAGKSSIAD-YVIASGRSSRQVTA-AQKLADRIKAATGYVSKIEGLPAADWVLLDAGDIIIHLFRPEVRSFYNLER-WG

Predicted Tertiary Structure


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TM-score=0.911 to 2id1A SCOP code=d.218.1.12	TM-score=0.931 to 2o5aA SCOP code=d.218.1.12	TM-score=0.930 to 2o5aA SCOP code=d.218.1.12	TM-score=0.929 to 2o5aA SCOP code=d.218.1.12	TM-score=0.931 to 2o5aA SCOP code=d.218.1.12