Template-based Modeling Results for YBCV_ECOLI

Submitted Primary Sequence

>Length 136
MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEEEEEECCCEEEEEECCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCEEEEECHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR
5311110221022135323031001102413000000000121010002221001030334102023242221022002213243020220020015000010001022110000123110000111322232134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR
1	MUSTER	2hh8A	0.795	0.934	3.575	threading_1	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ--------
2	SPARKS	2hh8a	0.795	0.934	3.848	threading_2	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ--------
3	PROSPECT2	2hh8A	0.787	0.934	2.384	threading_3	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESI--------Q
4	PPA-I	2hh8A	0.795	0.934	6.228	threading_4	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ--------
5	HHPRED-l	2hh8_A	0.795	0.934	10.352	threading_5	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ--------
6	HHPRED-g	2hh8_A	0.795	0.934	8.119	threading_6	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ--------
7	SP3	2hh8a	0.795	0.934	2.067	threading_7	-DQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ--------
8	SAM-T99	2hh8A	0.802	0.926	7.720	threading_8	--QVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQ--------
9	MUSTER	3db7A	0.098	0.824	0.694	threading_9	VTQPQLAQQFIKQHFSDSK-VALAKE-SDFLYKSYEVIFTNGNKVEFDKKGNWEEVDCKHTS--VPVAIIPAAIQKYVTTNYPDAKVL----------KIERYEVKLSNRTELKFDLKFNLIDIDN----------
10	SPARKS	3db7a	0.086	0.853	0.785	threading_10	VTQPQLAQQFIKQHFSDSKVA--LAKESDFLYKSYEVIFTNGNKVEFDKKGNWEEVDCKHTSVPVAIIP--AAIQKYVTTNYPDAKVLKI------ERDKKDYEVKLSNRTELKFDLKFNLIDIDN----------

Predicted Tertiary Structure


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TM-score=0.965 to 2hh8A SCOP code=d.358.1.1	TM-score=0.965 to 2hh8A SCOP code=d.358.1.1	TM-score=0.965 to 2hh8A SCOP code=d.358.1.1	TM-score=0.965 to 2hh8A SCOP code=d.358.1.1	TM-score=0.965 to 2hh8A SCOP code=d.358.1.1