Template-based Modeling Results for YBCC_ECOLI

Submitted Primary Sequence

>Length 87
MKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR
CEEEECCCCCCCHHHHHHHHHHEEEECCEEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR
310102123203221011012000012110000001014144400000002113300220140032003202300230212223334
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR
1	MUSTER	1avqA	0.966	1.000	1.455	threading_1	MKFRLGGFEAIKSAYMAQVQYSMWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMASFDEIVPEFIEKMDEALAEIGFVFGEQWR
2	SPARKS	1avqa	0.966	1.000	3.778	threading_2	MKFRLGGFEAIKSAYMAQVQYSMWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMASFDEIVPEFIEKMDEALAEIGFVFGEQWR
3	PROSPECT2	1avqa	0.954	1.000	1.046	threading_3	SKFRLGGFEAIKSAYMAQVQYSMWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMASFDEIVPEFIEKMDEALAEIGFVFGEQWR
4	PPA-I	1avqA	0.966	1.000	2.911	threading_4	MKFRLGGFEAIKSAYMAQVQYSMWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMASFDEIVPEFIEKMDEALAEIGFVFGEQWR
5	HHPRED-l	3sm4_A	0.965	0.989	6.342	threading_5	MKFRLGGFEAIKSAYMAQVQYSMWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMASFDEIVPEFIEKMDEALAEIGFVFGEQW-
6	HHPRED-g	3sm4_A	0.931	1.000	4.596	threading_6	FMKRLGGFEAIKSAYMAQVQYSMWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMASFDEIVPEFIEKMDEALAEIGFVFGEQWR
7	SP3	1avqa	0.966	1.000	3.476	threading_7	MKFRLGGFEAIKSAYMAQVQYSMWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMASFDEIVPEFIEKMDEALAEIGFVFGEQWR
8	SAM-T99	1avqA	0.966	1.000	5.188	threading_8	MKFRLGGFEAIKSAYMAQVQYSMWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMASFDEIVPEFIEKMDEALAEIGFVFGEQWR
9	MUSTER	1k2yX3	0.137	0.839	0.831	threading_9	INITVT--EDSKFAIIEALQRDVRVDYPKGWGLVRAS---NTTPVLVLRFE-TEEELERIKTVFRNQLKAVD---SSLPVPF-----
10	SPARKS	2dyta	0.213	0.862	0.681	threading_10	VGFNSNGFEDISADYRTKT-----ATIEK-------LPFYKNSVLSVSIPCKHANVMKILLDKVRVVRQRRRKELQEEQELDGGDWD

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.625 to 1avqA SCOP code=c.52.1.13	TM-score=0.625 to 1avqA SCOP code=c.52.1.13	TM-score=0.625 to 1avqA SCOP code=c.52.1.13	TM-score=0.625 to 1avqA SCOP code=c.52.1.13	TM-score=0.625 to 1avqA SCOP code=c.52.1.13