Template-based Modeling Results for YBAZ_ECOLI

Submitted Primary Sequence

>Length 129
MLVSCAMRLHSGVFPDYAEKLPQEEKMEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWNY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLVSCAMRLHSGVFPDYAEKLPQEEKMEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWNY
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCEECHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLVSCAMRLHSGVFPDYAEKLPQEEKMEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWNY
212200131221223322330232332343220012002001301301000001004302213001000000450120010000000042020111122121111003222020222010103302133
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLVSCAMRLHSGVFPDYAEKLPQEEKMEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWNY
1	MUSTER	2kimA	0.510	0.775	3.913	threading_1	-----------------------------MDQFLVQIFAVIHQIPKGKVSTYGEIAKMAGYPGYARHVGKALGNLPEGSKLPWFRVINSQGKISLKGRDLDRQKQKLEAEGIEVSEIGKIALRKYKWQP
2	SPARKS	1qnta	0.254	0.884	4.009	threading_2	QCTAWLNAYFHQPEAIEEFPVPALPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRL---------------
3	PROSPECT2	2kifA	0.520	0.775	2.478	threading_3	M-----------------------------DQFLVQIFAVIHQIPKGKVSTYGEIAKMAGYPGYARHVGKALGNLPEGSKLPWFRVINSQGKISLKGRDLDRQKQKLEAEGIEVSEIGKIALRKYKWQP
4	PPA-I	1eh6A2	0.302	0.744	5.925	threading_4	-----------------------HPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRLGKPGL----------
5	HHPRED-l	1sfe_A	0.243	0.860	4.882	threading_5	MFQQHVREVIA--SLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGSLSGYRWGVSRKAQLLRREAEN----------------
6	HHPRED-g	1sfe_A	0.259	0.837	4.708	threading_6	QHVREVIASLNQRDTPLTLPLDI-----RGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGSLSGYRWGVSRKAQLLRREAEN----------------
7	SP3	1qnta	0.254	0.884	3.706	threading_7	QCTAWLNAYFHQPEAIEEFPVPALPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRL---------------
8	SAM-T99	2kimA	0.510	0.775	4.071	threading_8	-----------------------------MDQFLVQIFAVIHQIPKGKVSTYGEIAKMAGYPGYARHVGKALGNLPEGSKLPWFRVINSQGKISLKGRDLDRQKQKLEAEGIEVSEIGKIALRKYKWQP
9	MUSTER	1eh6A2	0.302	0.744	3.859	threading_9	-----------------------HPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRLGKPGL----------
10	SPARKS	1sfe_	0.259	0.837	3.942	threading_10	QHVREVIASLNQRDTPLTLPLDI-----RGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGSLSGYRWGVSRKAQLLRREAEN----------------

Predicted Tertiary Structure


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TM-score=0.663 to 1sfeA SCOP code=a.4.2.1	TM-score=0.869 to 1eh6A SCOP code=a.4.2.1	TM-score=0.814 to 1eh6A SCOP code=a.4.2.1	TM-score=0.662 to 1eh6A SCOP code=a.4.2.1	TM-score=0.869 to 1eh6A SCOP code=a.4.2.1