Template-based Modeling Results for YBAV_ECOLI

Submitted Primary Sequence

>Length 123
MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAAQSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVEDLKQVPGMGNSLVERNLAVLTL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAAQSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVEDLKQVPGMGNSLVERNLAVLTL
CCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHCCEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAAQSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVEDLKQVPGMGNSLVERNLAVLTL
553113000100010000011000010211332223232322223232222242233322200012010310141032012310210010133213132131033031113200220131123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAAQSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVEDLKQVPGMGNSLVERNLAVLTL
1	MUSTER	2eduA	0.286	0.740	1.978	threading_1	------------------------------GSSGSSGEKAEDCWELQISPELLAHGRQKILDLLNEGSARDLRS--QRIGPKKAQLIVGWRELHGPFSQVEDLERVEGITGKQMESFLKANIL
2	SPARKS	2edua	0.283	0.748	2.820	threading_2	------------------------------GSSGSSGEKAEDCWELQISPELLAHGRQKILDLLNEGSARDLR-SLQRIGPKKAQLIVGWRELHGPFSQVEDLERVEGITGKQMESFLKANIL
3	PROSPECT2	2eduA	0.283	0.748	1.312	threading_3	------------------------------GSSGSSGEKAEDCWELQISPELLAHGRQKILDLLNEGSARDLRS-LQRIGPKKAQLIVGWRELHGPFSQVEDLERVEGITGKQMESFLKANIL
4	PPA-I	2eduA	0.283	0.748	2.359	threading_4	------------------------------GSSGSSGEKAEDCWELQISPELLAHGRQKILDLLNEGSARDLRSL-QRIGPKKAQLIVGWRELHGPFSQVEDLERVEGITGKQMESFLKANIL
5	HHPRED-l	1s5l_U	0.222	0.659	3.694	threading_5	---------------------------AA--TASTE-------EELVNVVDEKLGTAYGEKIDLNNTNIAAFI-QYRGLYPTLAKLIVK----NAPYESVEDVLNIPGLTERQKQILRENLT-
6	HHPRED-g	3psf_A	0.123	0.992	3.416	threading_6	VEDEVAIRYQNSERAAQEFPNKPKYCIALARYMHSPLLEYANLTSEEVRSLSIHQNVNLVSVEVNKAYASAL-KYISGFGKRKAIDFLQSLQRNEPLLARQQLITHNILHKTIFMNSAGFLYI
7	SP3	2edua	0.315	0.748	2.945	threading_7	-----------------------------GSSGSSGEKAE-DCWELQISPELLAHGRQKILDLLNEGSARDLR-SLQRIGPKKAQLIVGWRELHGPFSQVEDLERVEGITGKQMESFLKANIL
8	SAM-T99	3bzkA	0.242	0.976	3.527	threading_8	-SEAGASVYSASELAAKEFPELDRGAVSIARRLQDPLAELVKIEPKSIGVVVEDCVNAVG-VDVNTASAALLAR-ISGLNSTLAQNIVAHRDANGAFRTRDELKKVSRLGEKTFEQAAGFLRV
9	MUSTER	2duyA	0.422	0.520	1.863	threading_9	-----------------------------------------------------PLPQAQTPVSLNEASLEEL--ALPGIGPVLARRIVEGR----PYARVEDLLKVKGIGPATLERLRPYLRP
10	SPARKS	3bzca	0.238	0.992	2.604	threading_10	VSEAGASVYSASELAAKEFPVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYEDCVNAVGVDVNTASAALLA-RISGLNSTLAQNIVAHRDANGAFRTRDELKKVSRLGEKTFEQAAGFLRV

Predicted Tertiary Structure


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TM-score=0.781 to 2eduA SCOP code=a.60.2.7	TM-score=0.780 to 2eduA SCOP code=a.60.2.7	TM-score=0.810 to 2eduA SCOP code=a.60.2.7	TM-score=0.783 to 2eduA SCOP code=a.60.2.7	TM-score=0.776 to 2eduA SCOP code=a.60.2.7