Template-based Modeling Results for YBAQ_ECOLI

Submitted Primary Sequence

>Length 113
MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA
CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA
55333342100010012100421402022003303113300210022223022300120030030111000001100101212332323310230220131113333323424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA
1	MUSTER	2ebyA	1.000	0.903	3.288	threading_1	------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
2	SPARKS	2ebya	1.000	0.903	3.672	threading_2	------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
3	PROSPECT2	2ebyA	1.000	0.903	1.815	threading_3	------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
4	PPA-I	2ebyA	1.000	0.903	4.670	threading_4	------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
5	HHPRED-l	2eby_A	1.000	0.903	3.568	threading_5	------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
6	HHPRED-g	2eby_A	1.000	0.903	4.160	threading_6	------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
7	SP3	2ebya	1.000	0.903	3.809	threading_7	------KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREER-----
8	SAM-T99	3trbA	0.404	0.788	3.915	threading_8	------RPIHPGEILAEE-LGFLDKSANQLAKHLAIPTNRVTAILNGARSITADTALRLAKFFGTTPEFWLNLQDAYDIKALKKSGKKIEKEVTPY-----------------
9	MUSTER	3cecA	0.311	0.796	2.586	threading_9	V-----RPIHPGEVIADILDDL-DINTANFAEILGVSNQTIQEVINGQRSITVDIAIRLGKALGNGPRLWLNLQQKVDLWYALQSH--KEEYEQVTLV---------------
10	SPARKS	3ceca	0.322	0.796	3.157	threading_10	-----VRPIHPGEVIADILDD-LDINTANFAEILGVSNQTIQEVINGQRSITVDIAIRLGKALGNGPRLWLNLQQKVDLWYALQSH--KEEYEQVTLV---------------

Predicted Tertiary Structure


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TM-score=0.742 to 2ictA TM-score=0.872 to native SCOP code=a.35.1.3	TM-score=0.742 to 2ictA TM-score=0.872 to native SCOP code=a.35.1.3	TM-score=0.742 to 2ictA TM-score=0.872 to native SCOP code=a.35.1.3	TM-score=0.742 to 2ictA TM-score=0.872 to native SCOP code=a.35.1.3	TM-score=0.742 to 2ictA TM-score=0.872 to native SCOP code=a.35.1.3

Experimental Structure

Download 2ebyA

SCOP code=a.35.1.3