Template-based Modeling Results for YAJD_ECOLI


  Submitted Primary Sequence

>Length 115
MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK
CCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK
5521133223222111310041112000301221013003200011112311111410110000001003231131010121122222233234322303101002033223444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK
1HHPRED-l1e7l_A0.2370.8431.022threading_1MLLTGKLY----KEEKQKFYDAQNGKCLICQRELNPDVQ----ANHLDHDHELNGPAGKVRGLLCNLCDAAEGQMKHKFNRSGLK---GQGVD------YLEWLENLLTYLKSD-
2HHPRED-l2qgp_A0.1620.6431.007threading_2--------VKREKESQWWKNRIARGICHYCGEIFPPEE---LT-DHLVPVVRGGKSTRGNVVPACKECNNRKKYLLPVWEEYLDSL-----------------------------
3MUSTER2qgpB0.1550.7300.974threading_3IVEVSEQEVKREK-EKARELRRSQWICHYCGEIFPPEEL----TDHLVPVVRGGKSTRGNVVPACKECNNRKKYLPVEWEEYLDSL------ESE--------------------
4SPARKS1e7la20.2140.8520.871threading_4--MLLTGKLYKE--EKQKFYDAQNGKCLICQRE-LNPDVQAN---HLDHDHENGPKAGKVRGLLCNLCDAAEGQMKHKFNRSGLKGQGVDYLE---------WLENLLTYLKSDY
5PROSPECT21e7la20.2210.8260.707threading_5MLLTGKLYKE----EKQKFYDAQNGKCLICQRELNPDVQAN----HLDHDHELNGPKAGKVRLLCNLCDAAEGQMKHKFNRSGLKGQGVDY------------LEWLENLLTQNN
6PPA-I1gh6A0.1240.8430.880threading_6ERSAWGNIPLMRKAYLKKCKEFHP---DKGGDEEKMKKMNTLYKMEDGVKYAHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSSDDEAT---------------
7HHPRED-l2dmd_A0.2450.4610.801threading_7YAAADSSSLNKH--LR-IHSDERPFKCQICPYASR--NSSQLTVHLRSHTGDSGPSSG---------------------------------------------------------
8HHPRED-g1e7l_A0.2350.8520.999threading_8MLLTGKLYKE----EKQKFYDAQNGKCLICQRELNPDVQA----NHLDHDHELNGPAGKVRGLLCNLCDAAEGQMKHKFNRSGLK---GQG------VDYLEWLENLLTYLKSDY
9SP33fw2a0.1400.9910.690threading_9YASLPEKITRSSDAFKQKSINFWASWNDSISQKQSNSELREIYKKYKKNKYISLDVDKQQWKDAIKQVCDFGGLNSEVAKQYSIYKIPANSSDGKILAKNLRLKKKIENIVEEA-
10SAM-T992qncA0.2130.7740.952threading_10----MLLTGKLYKEEKQKFYDAQNGKCLICQRELNPD----VQANHLDHDHELNGP--K---LLCNLCDAAEGQMKHKFNRSGLKGQGVDYLEWLENLLTYL-------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.437 to 1nzyB
SCOP code=c.14.1.3
TM-score=0.651 to 2qncA
SCOP code=a.140.4.1
TM-score=0.456 to 1yi2U
SCOP code=g.39.1.6
TM-score=0.469 to 1s1iS
SCOP code=i.1.1.1
TM-score=0.462 to 1yi2U
SCOP code=g.39.1.6