Template-based Modeling Results for YAGP_ECOLI

Submitted Primary Sequence

>Length 136
MPAPVVLILAAGRGECFLASGGNTHKCIGWRQSPEVAPYRWPFEENGRTFDLAIEPQITTNDLRLMLRLALAGGGITIATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDYVKEWRQQLA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPAPVVLILAAGRGECFLASGGNTHKCIGWRQSPEVAPYRWPFEENGRTFDLAIEPQITTNDLRLMLRLALAGGGITIATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDYVKEWRQQLA
CCCCEEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCEEEEEEECCEEEEEECCCCEEECCHHHHHHHHHHCCCEEECCHHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPAPVVLILAAGRGECFLASGGNTHKCIGWRQSPEVAPYRWPFEENGRTFDLAIEPQITTNDLRLMLRLALAGGGITIATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDYVKEWRQQLA
4511010000012121210100340200001112421112010223222020203120101102000100121000000021002210320200100331013211000000222200210200021022123325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPAPVVLILAAGRGECFLASGGNTHKCIGWRQSPEVAPYRWPFEENGRTFDLAIEPQITTNDLRLMLRLALAGGGITIATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDYVKEWRQQLA
1	MUSTER	3szpA	0.213	0.934	2.721	threading_1	I-GEVKDILVASHPQPTHAEELHQHQLLKGYPLLK-----WQLTSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHL---
2	SPARKS	3szpa	0.200	0.919	4.311	threading_2	VASPQYL---SSHPQPTHAEELHQHQLLKGYPLLK-----WQLTSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHL---
3	PROSPECT2	3hhgA2	0.208	0.956	2.184	threading_3	YPHDSRFRVIASHGTPQSTEELAGHQCLGFTEPGSLN--TWAV-LDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEE---LG
4	PPA-I	3szpA3	0.196	0.713	6.705	threading_4	VASPQYL---SSHPQPTHAEELHQHQLLKGY-----PLLKWQLTNQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPR-------------------------------
5	HHPRED-l	2qsx_A	0.136	0.868	3.258	threading_5	LLCEETLLLIGNTNLP-----ISHYPFIPQTTR---PQLWEQFKQEN-----ITYHSVGFEHFYLACEAVR-EKGLALLPDF-AQFSILRGDIQHIGNLKLHSGYGYYVVIPNFRLTSRKVALFHDWLKDKLT---
6	HHPRED-g	3fd3_A	0.146	0.904	3.103	threading_6	TASPDF-A--RHFADGVTPAALARAPGLTFNQ-KDRLQASWIRTALGEDVSYP---THWLPSTDGFVKASLAG-GWGLNPVQLVAEHLAAGRLVEL-PGTPLD---IPLYWQVNRLAAERLAGLTAN-VGTARVVL
7	SP3	3hhfb	0.213	0.934	3.772	threading_7	IASPEYL---AKHGTPQSTEELAGHQCLGFTEP--GSLNTWAV-LDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTPFNAVYYSDKAVNLRLRVFLDFLVEELG---
8	SAM-T99	3szpA	0.181	0.934	3.572	threading_8	DILVASPQYLSSHPQPTHAEELHQHQLLKGYPLL-----KWQLTNQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYH----
9	MUSTER	3hhgE2	0.188	0.978	2.521	threading_9	LDFDSRFRVIAKHGTPQSTEELAGHQCLGFTEPGSLN--TWAVLDAQGN-PYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTPFNAVYYSDKAVNLRLRVFLDFLVEELGNNL
10	SPARKS	3hhfb	0.213	0.934	4.128	threading_10	IASPEYL---AKHGTPQSTEELAGHQCLG--FTEPGSLNTWAV-LDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTPFNAVYYSDKAVNLRLRVFLDFLVEELG---

Predicted Tertiary Structure


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TM-score=0.602 to 1utbB SCOP code=c.94.1.1	TM-score=0.581 to 1utbB SCOP code=c.94.1.1	TM-score=0.584 to 1utbB SCOP code=c.94.1.1	TM-score=0.568 to 1utbB SCOP code=c.94.1.1	TM-score=0.606 to 1utbB SCOP code=c.94.1.1