Template-based Modeling Results for YAFN_ECOLI

Submitted Primary Sequence

>Length 97
MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSASAFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSASAFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE
CCCHHHCCEEEHHHHHHCHHHHHCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSASAFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE
5531113110002203300131034210000122200000001100210020013131230033313232131320111023013323333133135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSASAFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE
1	MUSTER	3g5oA	0.154	0.804	1.076	threading_1	MR------ILPISTIKGKLNEFVDQDQITITKNGAPAAVLVGADEWESLQETLYWLAQ-------------GIRESIAEADADIASGRTYGEDEIRA
2	SPARKS	3g5oa	0.152	0.814	1.063	threading_2	MR------ILPISTIKGKLNEFVDQDQITITKNGAPAAVLVGADEWESLQETLYWL------------AQPGIRESIAEADADIASGRTYGEDEIRA
3	PPA-I	3g5oA	0.138	0.825	1.293	threading_3	-----LMRILPISTIKGKLNEFVDQDQITITKNGAPAAVLVGADEWESLQETLYWLAQ------------PGIRESIAEADADIASGRTYGEDEIRA
4	HHPRED-l	3hs2_A	0.212	0.536	2.296	threading_4	------MQSINFRTARGNLSEVLNGEEVEITRRGREPAVIVSKATFEAYKKAALDAEF---------------------------------------
5	HHPRED-g	3g5o_A	0.152	0.814	2.101	threading_5	------MRILPISTIKGKLNEFVDQDQITITKNGAPAAVLVGADEWESLQETLYWLEIAEADADIASGRTYGEDEIRAEFGVPRR------------
6	PPA-I	2a6qA	0.141	0.804	1.223	threading_6	MR------TISYSEARQNLSATMMHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPANARRL-------MDSIDSLKSGKGTEKDIIE------
7	HHPRED-l	3g5o_A	0.152	0.814	2.197	threading_7	------MRILPISTIKGKLNEFVDQDQITITKNGAPAAVLVGADEWESLQETLYWLAIREIAEADADGRTYGEDEIRAEFGVPRR------------
8	HHPRED-g	3hs2_A	0.212	0.536	1.924	threading_8	------MQSINFRTARGNLSEVLNGEEVEITRRGREPAVIVSKATFEAYKKAALDAEF---------------------------------------
9	PPA-I	3d55C	0.179	0.804	1.038	threading_9	-------MSISASEARQRLFPLIEHQPVRITSRAGD-AVLMSADDYDAWQETVYLPENARRLMEAVARDK-AGHSAFTKSVDELREM----------
10	HHPRED-l	3hry_A	0.175	0.649	2.196	threading_10	------MQSINFRTARGNLSEVLNGEEVEITRRGREPAVIVSKATFEAYKKAALDAEFASLFDTLDST----N------------------------

Predicted Tertiary Structure


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TM-score=0.388 to 2odkD SCOP code=d.306.1.1	TM-score=0.374 to 2es4D SCOP code=a.137.15.1	TM-score=0.576 to 2a6qA SCOP code=d.306.1.1	TM-score=0.508 to 2odkD SCOP code=d.306.1.1	TM-score=0.498 to 2odkD SCOP code=d.306.1.1