Template-based Modeling Results for YACC_ECOLI

Submitted Primary Sequence

>Length 115
MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
CCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
5532110111000010011121023210210020000000011101133023110120000004213120121211103201230031034010212320210013011112224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
1	MUSTER	3utkA	0.272	0.800	2.240	threading_1	---------------------VPANEQISQLASLVAASKYLRVQCERSDLPDGTILKTAVNVAVQKGWDTGRYQS--LPQLSENLYQGLLKDGTPKATQCSSFNRTMTPFLDAMR
2	SPARKS	3utka	0.275	0.791	2.551	threading_2	----------------------VPNEQISQLASLVAASKYLRVQCERSDLPDGTILKTAVNVAVQKGWDTGRYQS--LPQLSENLYQGLLKDGTPKATQCSSFNRTMTPFLDAMR
3	PROSPECT2	4a56A	0.217	0.800	1.362	threading_3	VSG---------------------QAQLEQLASVAAGARYLKNKCNRSDLPADEINRAAINVGKKRGWANIDANL--LSQRSAQLYQQLQQDSTPEATKCSQFNRQLAPFIDSLR
4	PPA-I	3utkA	0.272	0.800	2.067	threading_4	---------------------VPANEQISQLASLVAASKYLRVQCERSDLPDGTILKTAVNVAVQKGWDTGRYQS--LPQLSENLYQGLLKDGTPKATQCSSFNRTMTPFLDAMR
5	HHPRED-l	3utk_A	0.270	0.774	6.386	threading_5	-----------------------ANEQISQLASLVAASKYLRVQCERSDLPDDGILKTAVNVAVQKGWDTGRYQS--LPQLSENLYQGLLKDGTPKATQCSSFNRTMTPFLDAM-
6	HHPRED-g	3utk_A	0.267	0.783	5.737	threading_6	-----------------------ANEQISQLASLVAASKYLRVQCERSDLPDDGILKTAVNVAVQKGWDTGRYQS--LPQLSENLYQGLLKDGTPKATQCSSFNRTMTPFLDAMR
7	SP3	3utka	0.272	0.800	2.371	threading_7	---------------------VPANEQISQLASLVAASKYLRVQCERSDLPDGTILKTAVNVAVQKGWDTGRYQS--LPQLSENLYQGLLKDGTPKATQCSSFNRTMTPFLDAMR
8	SAM-T99	3utkA	0.272	0.800	1.538	threading_8	VPA---------------------NEQISQLASLVAASKYLRVQCERSDLPDGTILKTAVNVAVQKGWDTGRYQSLP--QLSENLYQGLLKDGTPKATQCSSFNRTMTPFLDAMR
9	MUSTER	4a56A	0.217	0.800	2.068	threading_9	---------------------VSGQAQLEQLASVAAGARYLKNKCNRSDLPDEAINRAAINVGKKRGWANIDA--NLLSQRSAQLYQQLQQDSTPEATKCSQFNRQLAPFIDSLR
10	SPARKS	4a56a	0.231	0.791	2.107	threading_10	----------------------VSQAQLEQLASVAAGARYLKNKCNRSDLPDEAINRAAINVGKKRGWANIDA--NLLSQRSAQLYQQLQQDSTPEATKCSQFNRQLAPFIDSLR

Predicted Tertiary Structure


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TM-score=0.504 to 1pp1X SCOP code=a.206.1.1	TM-score=0.425 to 1x8yA SCOP code=h.1.20.1	TM-score=0.502 to 1pp1X SCOP code=a.206.1.1	TM-score=0.488 to 1lfuP SCOP code=a.4.1.1	TM-score=0.504 to 1pp1X SCOP code=a.206.1.1