Template-based Modeling Results for VXIS_ECOLI

Submitted Primary Sequence

>Length 81
MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKKNDSLLLQRILSNGSQTA
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKKNDSLLLQRILSNGSQTA
CCCEEEHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKKNDSLLLQRILSNGSQTA
541100032101321422111110022003322100101321210102330100032222214433221022012321434
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKKNDSLLLQRILSNGSQTA
1	MUSTER	1pm6A	0.408	0.877	2.026	threading_1	M--YLTLQEWNARQ--RRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVD-LNRPV----TGSLLKRI-RNGKKAK
2	SPARKS	1lx8a	0.382	0.679	2.076	threading_2	--MYLTLQEWNARQ--RRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKV-DLNRP---------------------
3	PROSPECT2	1lx8A	0.364	0.679	0.750	threading_3	MY--LTLQEWNAR--QRRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVDL----------------------NRP
4	PPA-I	1pm6A	0.338	0.877	3.247	threading_4	--MYLTLQEWNARQ--RRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKV-DLNRPVTGSLLKR-----IRNGKKAK
5	HHPRED-l	1pm6_A	0.352	0.877	6.256	threading_5	--MYLTLQEWNAR-Q-RRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVDL-NRPV----TGSLLKRIRNGKKAK-
6	HHPRED-g	1pm6_A	0.347	0.889	4.814	threading_6	--MYLTLQEWNAR-Q-RRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVDL-NRPV----TGSLLKRIRNGKKAKS
7	SP3	1lx8a	0.400	0.679	0.942	threading_7	--MYLTLQEWNARQRR--PRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKV-DLNRP---------------------
8	SAM-T99	1pm6A	0.324	0.877	3.640	threading_8	--MYLTLQEWNARQRR--PRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKVD------LNRPVTGSLLKRIRNGKKAK
9	MUSTER	5croA	0.259	0.716	0.923	threading_9	MEQRITLKDYAMRFG-----QTKTAKDLVYQSAIN-KAIHAGRFLTINADGSVYAEEVKP-FPSN----------------
10	SPARKS	2od5a	0.086	1.000	0.912	threading_10	ESKTVRIREKIKKFLGDRPRNTAEILEHINSTRHGTTSQQLGNVLSKDKDIVKVGYIKRSGILSGGYDIRNWVAEHCPEWT

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.696 to 1pm6A SCOP code=a.6.1.7	TM-score=0.357 to 3bzrA SCOP code=d.367.1.1	TM-score=0.580 to 1pm6A SCOP code=a.6.1.7	TM-score=0.575 to 1pm6A SCOP code=a.6.1.7	TM-score=0.690 to 1pm6A SCOP code=a.6.1.7