Template-based Modeling Results for USPF_ECOLI

Submitted Primary Sequence

>Length 144
MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCHHHHEECCHHHHHHHCCCCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR
512100000111313101200110120043230200000002212211112112213220022022202210220033143332202020120102210020034130000000012130220000010100132130211112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR
1	MUSTER	1mjhB	0.290	0.958	2.260	threading_1	MYKKILYPTDFS--ETAEIALKHVKAFKTLKAEEVILLHVIDEREIKS----VEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGTNLKEILLGSVTENVIKKSNKPVLVVK
2	SPARKS	3hgma	0.241	0.979	3.131	threading_2	MFNRIMVPVDGS--KGAVKALEKGVGLQQLTGAELYILCVFKHHSLASLSMARPEQLDIPDDALKDYATEIAVQAKTRATELGVPVRAFVKGGRPSRTIVRFARKRECDLVVIGAQTNGDKSLLLGSVAQRVAGSAHCPVLVV-
3	PROSPECT2	3fg9A	0.179	0.972	2.506	threading_3	LVYRILLTVDEDDNTSSERAFRYATTLAHDYDVPLGICSVLESEDINI----FDSLTPSKIQAKRKHVEDVVAEYVQLAEQRGVVEPLVYEGGDVDDVILEVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAPISVIVVR
4	PPA-I	3hgmA	0.255	0.979	3.225	threading_4	MFNRIMVPVDGS--KGAVKALEKGVGLQQLTGAELYILCVFKHHSLSMARPEQLDIPDDALKDYATEIAVQAKTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQTNGDKSLLLGSVAQRVAGSAHCPVLVV-
5	HHPRED-l	1mjh_A	0.296	0.938	3.276	threading_5	MYKKILYPTDFS--ETAEIALKHVKAFKTLKAEEVILLHVIDEREIK------EEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGTNLKEILLGSVTENVIKKSNKPVLVV-
6	HHPRED-g	1mjh_A	0.285	0.951	2.725	threading_6	MYKKILYPTDFSET--AEIALKHVKAFKTLKAEEVILLHVIDEREIK-----VEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKNLKEILLGSVTENVIKKSNKPVLVVK
7	SP3	3s3ta	0.236	0.972	3.374	threading_7	RYTNILVPVDSS--DAAQAAFTEAVNIAQRHQANLTALYVVDDSAYHTPALDPV--LSELLDAEAAHAKDARQRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQPEIDLIVLGATTNSPHRVAVGSTTSYVVDHAPCNVIVIR
8	SAM-T99	2z3vA	0.272	0.944	2.999	threading_8	MFKTILLAYDGSEHA--RRAAEVAKAEAEAHGARLIVVHAYEPVPDYLGEP----FFEEALRRRLERAEGVLEEARALTGVPKE--DALLLEGVPAEAILQAARAEKADLIVMGTRGLGALGLFLGSQSQRVVAEAPCPVLLVR
9	MUSTER	2z3vA	0.279	0.944	2.223	threading_9	MFKTILLAYDGS--EHARRAAEVAKAEAEAHGARLIVVHAYEPVPDYLG----EPFFEEALRRRLERAEGVLEEARALTGVPKE--DALLLEGVPAEAILQAARAEKADLIVMGTRLGALGSLFLGSQSQRVVAEAPCPVLLVR
10	SPARKS	3s3ta	0.236	0.972	3.033	threading_10	RYTNILVPVDSS--DAAQAAFTEAVNIAQRHQANLTALYVVDDSAYHTPALDPV--LSELLDAEAAHAKDARQRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQHEIDLIVLGATTNSPHRVAVGSTTSYVVDHAPCNVIVIR

Predicted Tertiary Structure


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TM-score=0.944 to 1mjhB SCOP code=c.26.2.4	TM-score=0.926 to 1mjhB SCOP code=c.26.2.4	TM-score=0.819 to 2z3vA SCOP code=c.26.2.4	TM-score=0.790 to 2z3vA SCOP code=c.26.2.4	TM-score=0.808 to 2z3vA SCOP code=c.26.2.4