Template-based Modeling Results for USPD_ECOLI

Submitted Primary Sequence

>Length 142
MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK
5411100000102330110021002003323120000000211121121111200220122022202310230042042312211012020121002003423010000011121012000002001330201000021246
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK
1	MUSTER	1jmvA	0.314	0.986	3.111	threading_1	-MYKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIKIDMLVVPLRD-
2	SPARKS	1jmva	0.314	0.986	3.536	threading_2	-MYKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIKIDMLVVPLRD-
3	PROSPECT2	1jmva	0.321	0.986	2.363	threading_3	M-YKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIKIDMLVVPLRD-
4	PPA-I	1jmvA	0.314	0.986	3.292	threading_4	-MYKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIKIDMLVVPLRD-
5	HHPRED-l	1jmv_A	0.314	0.986	3.419	threading_5	-MYKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIKIDMLVVPLRD-
6	HHPRED-g	1jmv_A	0.314	0.986	2.791	threading_6	-MYKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIKIDMLVVPLRD-
7	SP3	1jmva	0.314	0.986	3.776	threading_7	-MYKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIKIDMLVVPLRD-
8	SAM-T99	1jmvA	0.314	0.986	3.245	threading_8	-MYKHILVAVDLSEESPILLKKAVGIAKRHDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIKIDMLVVPLRD-
9	MUSTER	2z3vA	0.201	0.944	2.800	threading_9	-MFKTILLAYDGSEHARRAAEVAKAEAEAHGARLIVVHAYEPVPDYLG---EPFFEEALRRRLERAEGVLEEARALTGVPKEDALLLEGVPAEAILQAARAEKADLIVMGTRGLGALFLGSQSQRVVAEAPCPVLLVR----
10	SPARKS	3tnja	0.254	0.915	3.416	threading_10	SVYHHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVLDYGTAIPLDTE-----TTYDAMLDVEKQKLSQIGNTLGIDPAHRWLVWGEPREEIIRIAEQENVDLIVVGSH------LGSTANSVLHYAKCDVLAVRLRD-

Predicted Tertiary Structure


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TM-score=0.990 to 1jmvA SCOP code=c.26.2.4	TM-score=0.990 to 1jmvA SCOP code=c.26.2.4	TM-score=0.990 to 1jmvA SCOP code=c.26.2.4	TM-score=0.989 to 1jmvA SCOP code=c.26.2.4	TM-score=0.990 to 1jmvA SCOP code=c.26.2.4