Template-based Modeling Results for TOLR_ECOLI

Submitted Primary Sequence

>Length 142
MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI
5532424244323120300000000000000010002112330313013123232223443320001011202000012433224121320021012214222321000101330312100200210330202100001134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI
1	MUSTER	2pfuA	0.211	0.669	1.978	threading_1	----------------------------------------MDVKVNLPASTSTPQPRPEK--PVYLSVKADNSMFIG-----NDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
2	SPARKS	2pfua	0.211	0.669	2.272	threading_2	----------------------------------------MDVKVNLPASTSTPQPRPE--KPVYLSVKADNSMFIG-----NDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
3	PROSPECT2	2pfuA	0.221	0.669	1.594	threading_3	M----------------------------------------DVKVNLPASTSTP--QPRPEKPVYLSVKADNSMFI-----GNDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
4	PPA-I	2pfuA	0.211	0.669	2.413	threading_4	----------------------------------------MDVKVNLPASTSTPQPRPE--KPVYLSVKADNSMFIG-----NDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
5	HHPRED-l	2pfu_A	0.213	0.662	4.129	threading_5	----------------------------------------MDVKVNLPASTSTPQPR--PEKPVYLSVKADNSMFIGN-----DPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEE-
6	HHPRED-g	2pfu_A	0.211	0.669	4.223	threading_6	----------------------------------------MDVKVNLPASTSTPQPR--PEKPVYLSVKADNSMFIGN-----DPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
7	SP3	2pfua	0.211	0.669	2.273	threading_7	----------------------------------------MDVKVNLPASTSTPQPRPEK--PVYLSVKADNSMFIG-----NDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET
8	SAM-T99	2pfuA	0.215	0.655	2.566	threading_8	----------------------------------------MDVKVNLPASTSTPQP--RPEKPVYLSVKADNSMFIG-----NDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGE--
9	MUSTER	2jwlA	0.500	0.521	1.362	threading_9	-----------------------------------------------------------GSVPVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQEFDKDNNTLFLVGGAKEVPYEEVIKALNLLHLAGIK---------
10	SPARKS	2jwka	0.500	0.521	1.456	threading_10	-----------------------------------------------------------GSVPVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQEFDKDNNTLFLVGGAKEVPYEEVIKALNLLHLAGIK---------

Predicted Tertiary Structure


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TM-score=0.445 to 2f9wA SCOP code=c.55.1.13	TM-score=0.464 to 2f9wA SCOP code=c.55.1.13	TM-score=0.448 to 2nrhB SCOP code=c.55.1.13	TM-score=0.461 to 2f9wA SCOP code=c.55.1.13	TM-score=0.448 to 2nrhB SCOP code=c.55.1.13