Template-based Modeling Results for LPTN_ECOLI


  Submitted Primary Sequence

>Length 24
MNILHICVTSKWFNIDNKIVDHRP
123456789012345678901234
--------10--------20
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNILHICVTSKWFNIDNKIVDHRP
CCEEEEEEEEEEEECCCEECCCCC
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--------10--------20
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNILHICVTSKWFNIDNKIVDHRP
430000000010010212113445
123456789012345678901234
--------10--------20
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNILHICVTSKWFNIDNKIVDHRP
1MUSTER1ho9A0.2921.0001.329threading_1SSIVHLCAISRYWSITQAIENLKP
2SPARKS1e0na0.2501.0002.092threading_2WEIIHENGRPLYYNAEQKTKLHYP
3PPA-I2ho2A0.1671.0001.268threading_3MRVQDTSGTYYWHIPTGTTQWEPP
4SP31e0na0.2501.0001.420threading_4WEIIHENGRPLYYNAEQKTKLHYP
5MUSTER2d5bA30.2610.9581.226threading_5EYEGLYCVSCERF-VEGLCPIHRP
6SPARKS1nuba20.3160.7921.150threading_6QN--HHCKHGKVCELDE---NNTP
7PPA-I2oeiA0.1671.0001.174threading_7MRVQDTSGTYYWHIPTGTTQWEPP
8SP31j5pa20.2500.8331.022threading_8LTVYSILRTLR--NLESKIIFG--
9MUSTER1vhgA10.2610.9581.194threading_9PTILNVETVAR-FTVSNRVYERRP
10SPARKS1j5pa20.2500.8331.144threading_10LTVYSILRTLR--NLESKIIFG--

  Predicted Tertiary Structure

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TM-score=0.351 to 1hpyA
SCOP code=j.15.1.1
TM-score=0.555 to 1o6wA
SCOP code=b.72.1.1
TM-score=0.619 to 2ho2A
SCOP code=b.72.1.1
TM-score=0.555 to 1o6wA
SCOP code=b.72.1.1
TM-score=0.468 to 2d5bA
SCOP code=a.27.1.1