Template-based Modeling Results for TATA_ECOLI

Submitted Primary Sequence

>Length 89
MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV
55222121000000000001113202200230010021024213433343332233232223322333232333324333234434334
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV
1	MUSTER	2l16A	0.333	0.573	2.360	threading_1	MFNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDE--------------------------------------
2	SPARKS	2l16a	0.314	0.573	1.720	threading_2	FSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDE--------------------------------------
3	PROSPECT2	2l16A	0.333	0.573	0.780	threading_3	MSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDE--------------------------------------
4	PPA-I	2l16A	0.314	0.573	2.509	threading_4	FSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDE--------------------------------------
5	HHPRED-l	2l16_A	0.333	0.573	5.297	threading_5	MFNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDE--------------------------------------
6	HHPRED-g	2l16_A	0.333	0.573	4.303	threading_6	MFNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDE--------------------------------------
7	SP3	2l16a	0.333	0.573	1.913	threading_7	MSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVSGDE--------------------------------------
8	SAM-T99	2l16A	0.333	0.539	2.754	threading_8	FSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSATKSLVS-----------------------------------------
9	MUSTER	2jn6A	0.157	1.000	1.103	threading_9	MPTKTYSEEFKRDAVALYENSDGALQQIANDLRVTLKNWIIKYGSNHNVQGTTPSAAVSEAEQIRQLKKENALQRARTRHPAESCLEHH
10	SPARKS	2df4c	0.159	0.989	0.704	threading_10	-TKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQF

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.465 to 1r7gA SCOP code=j.35.1.1	TM-score=0.451 to 2jr8A SCOP code=j.4.1.3	TM-score=0.451 to 2jr8A SCOP code=j.4.1.3	TM-score=0.470 to 2jr8A SCOP code=j.4.1.3	TM-score=0.451 to 2jr8A SCOP code=j.4.1.3